RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1067370" and tax_phylum = "Cossaviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cossaviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1067370 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1455932 1455932 PRJNA1067370_P_NODE_98922_length_245_cov_2.238372_g98373_i0 PRJNA1067370 98922 245 2.238372 5.4840114 Trichosanthes kirilowii parvo-like virus 2739862 Viruses Viruses 169 2.1e-37   NTclustered gi|1851268986|gb|MN832449.1| 2739862 g98373 i0 79.184 1 245 49 99 2 2 245 1885 1642 Trichosanthes kirilowii parvo-like virus strain pt111-phy-9-plant 111-Phytophthora_parasitica_virus genomic sequence, sequence blastn 245 169 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Trichosanthes kirilowii parvo-like virus
2731132 2731132 PRJNA1067370_P_NODE_116163_length_237_cov_2.079268_g115614_i0 PRJNA1067370 116163 237 2.079268 4.92786516 Luscinia sibilans parvo-like hybrid virus 2794515 Viruses Viruses 122 4.91e-31   NR QTE03982.1 2794515 g115614 i0 73.7 1.91139240506329 76 20 96.2 0 233 6 5 80 QTE03982.1 MAG: replication protein [Luscinia sibilans parvo-like hybrid virus] diamond 453 122 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Luscinia sibilans parvo-like hybrid virus
5283387 5283387 PRJNA1067370_P_NODE_110465_length_242_cov_0.911243_g109916_i0 PRJNA1067370 110465 242 0.911243 2.20520806 Parvoviridae sp. 1940570 Viruses Viruses 150 7.509999999999998e-32   NTclustered gi|2413975755|gb|OP933681.1| 1940570 g109916 i0 86.667 1.1198347107438 135 18 56 0 9 143 959 1093 MAG: Parvoviridae sp. isolate fi099par3 replication protein and capsid protein genes, complete cds blastn 271 150 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvoviridae sp.
14209700 14209700 PRJNA1067370_P_NODE_64052_length_274_cov_0.920398_g63503_i0 PRJNA1067370 64052 274 0.920398 2.52189052 Polyomavirus macaca1 3117236 Viruses Viruses 507 4.47e-139   NTclustered gi|2710391516|tpg|BK066515.1| 3117236 g63503 i0 100 115.284671532847 274 0 100 0 1 274 1497 1224 MAG TPA_asm: Polyomavirus macaca1 isolate Polyoma1 genomic sequence blastn 31588 507 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae   Polyomavirus macaca1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;