RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA1067370", tax_phylum = "Candidatus Bathyarchaeota" and tax_superkingdom = "Archaea"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Archaea · 4 ✖

tax_phylum 1

  • Candidatus Bathyarchaeota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1067370 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29814339 29814339 PRJNA1067370_P_NODE_115291_length_241_cov_0.916667_g114742_i0 PRJNA1067370 115291 241 0.916667 2.20916747 Candidatus Bathyarchaeia archaeon 3045160 Archaea Archaea 46.6 0.00142   NR MEM1569474.1 3045160 g114742 i0 43.4 1.9792531120332 53 28 66 1 213 55 213 263 MEM1569474.1 serine protein kinase RIO [Candidatus Bathyarchaeia archaeon] diamond 477 46.6 1 Archaea   Thermoproteati Candidatus Bathyarchaeota Candidatus Bathyarchaeia       Candidatus Bathyarchaeia archaeon
31426055 31426055 PRJNA1067370_P_NODE_79156_length_251_cov_1.415730_g78607_i0 PRJNA1067370 79156 251 1.41573 3.5534823 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 85.1 3.48e-18   NR MBL7118446.1 2026714 g78607 i0 56.7 1.45816733067729 60 26 71.7 0 251 72 145 204 MBL7118446.1 endonuclease III [Candidatus Bathyarchaeota archaeon] diamond 366 85.1 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
31647269 31647269 PRJNA1067370_P_NODE_22337_length_401_cov_1.384146_g21789_i0 PRJNA1067370 22337 401 1.384146 5.55042546 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 48.1 0.00275   NR MCW4043417.1 2026714 g21789 i0 31.6 1.31670822942643 114 70 83.8 4 3 338 552 659 MCW4043417.1 AAA family ATPase [Candidatus Bathyarchaeota archaeon] diamond 528 48.1 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
32659097 32659097 PRJNA1067370_P_NODE_10120_length_571_cov_1.594378_g9582_i0 PRJNA1067370 10120 571 1.594378 9.10389838 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 48.1 0.00987   NR TMI60447.1 2026714 g9582 i0 30.5 0.688266199649737 131 72 63.6 6 411 49 290 411 TMI60447.1 MAG: hypothetical protein E6H14_00625 [Candidatus Bathyarchaeota archaeon] diamond 393 48.1 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;