RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

9 rows where bioproject = "PRJNA1067370", tax_kingdom = "Pararnavirae" and tax_phylum = "Artverviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Artverviricota · 9 ✖

tax_kingdom 1

  • Pararnavirae · 9 ✖

bioproject 1

  • PRJNA1067370 · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1013219 1013219 PRJNA1067370_P_NODE_19661_length_423_cov_1.962857_g19113_i0 PRJNA1067370 19661 423 1.962857 8.30288511 root 1 Root_unresolved Root_unresolved 776 0   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g19113 i0 99.764 42.8510638297872 423 1 100 0 1 423 937 1359 Moloney murine leukemia virus, complete genome blastn 18126 776 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
8666505 8666505 PRJNA1067370_P_NODE_69387_length_265_cov_2.442708_g68838_i0 PRJNA1067370 69387 265 2.442708 6.4731762 root 1 Root_unresolved Root_unresolved 484 2.0199999999999998e-132   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g68838 i0 99.623 99.8150943396226 265 1 100 0 1 265 1921 1657 Moloney murine leukemia virus, complete genome blastn 26451 484 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
17591075 17591075 PRJNA1067370_P_NODE_6394_length_703_cov_1.466667_g5886_i0 PRJNA1067370 6394 703 1.466667 10.31066901 Gammaretrovirus 153135 Viruses Viruses 1293 0   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g5886 i0 99.858 98.6614509246088 703 1 100 0 1 703 3292 3994 Moloney murine leukemia virus, complete genome blastn 69359 1293 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
26592162 26592162 PRJNA1067370_P_NODE_70981_length_263_cov_1.378947_g70432_i0 PRJNA1067370 70981 263 1.378947 3.62663061 Murine leukemia virus 11786 Viruses Viruses 65.5 4.69e-10   NR AAA46514.1 11786 g70432 i0 58.2 0.76425855513308 67 28 76.4 0 9 209 397 463 AAA46514.1 env protein [Murine leukemia virus] diamond 201 65.5 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
28614704 28614704 PRJNA1067370_P_NODE_35447_length_334_cov_1.160920_g34899_i0 PRJNA1067370 35447 334 1.16092 3.8774728 Pitica errantivirus 3078414 Viruses Viruses 64.7 2.2e-9   NR WNO13945.1 3078414 g34899 i0 38.2 1.37425149700599 76 47 68.3 0 331 104 213 288 WNO13945.1 MAG: polyprotein [Pitica errantivirus] diamond 459 64.7 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Metaviridae Errantivirus Pitica errantivirus
29214871 29214871 PRJNA1067370_P_NODE_74029_length_258_cov_24.821622_g73480_i0 PRJNA1067370 74029 258 24.821622 64.03978476 Lampyris noctiluca errantivirus 1 2552986 Viruses Viruses 50.8 6.33e-5   NR QBP37036.1 2552986 g73480 i0 41.2 0.790697674418605 68 36 74.4 1 9 200 824 891 QBP37036.1 putative RdRP [Lampyris noctiluca errantivirus 1] diamond 204 50.8 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Metaviridae Errantivirus Lampyris noctiluca errantivirus 1
30130108 30130108 PRJNA1067370_P_NODE_98332_length_246_cov_0.890173_g97783_i0 PRJNA1067370 98332 246 0.890173 2.18982558 Pinus nigra virus 1 2267679 Viruses Viruses 106 1.74e-24   NR AXB54821.1 2267679 g97783 i0 63 0.98780487804878 81 30 98.8 0 2 244 581 661 AXB54821.1 polyprotein [Pinus nigra virus 1] diamond 243 106 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae   Pinus nigra virus 1
32081925 32081925 PRJNA1067370_P_NODE_33578_length_341_cov_1.003731_g33030_i0 PRJNA1067370 33578 341 1.003731 3.42272271 root 1 Root_unresolved Root_unresolved 162 1.2999999999999996e-43   NR QHB15185.1 2692414 g33030 i0 76.8 4.17888563049853 95 22 83.6 0 55 339 1289 1383 QHB15185.1 polyprotein [Endogenous retrovirus sp.] diamond 1425 162 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae   Endogenous retrovirus sp.
32312159 32312159 PRJNA1067370_P_NODE_51279_length_294_cov_0.932127_g50730_i0 PRJNA1067370 51279 294 0.932127 2.74045338 Endogenous retrovirus sp. 2692414 Viruses Viruses 171 4.0699999999999996e-47   NR QHB15185.1 2692414 g50730 i0 79.6 2.97959183673469 98 20 100 0 294 1 1291 1388 QHB15185.1 polyprotein [Endogenous retrovirus sp.] diamond 876 171 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae   Endogenous retrovirus sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;