RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA1067370", tax_kingdom = "Methanobacteriati" and tax_phylum = "Thermoplasmatota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 3 ✖

tax_kingdom 1

  • Methanobacteriati · 3 ✖

bioproject 1

  • PRJNA1067370 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7391028 7391028 PRJNA1067370_P_NODE_84306_length_250_cov_0.870056_g83757_i0 PRJNA1067370 84306 250 0.870056 2.17514 Methanomassiliicoccales archaeon Mx- 1906667 Archaea Archaea 139 6.120000000000001e-36   NR TQS80226.1 1820006 g83757 i0 79.5 0.996 83 17 99.6 0 249 1 252 334 TQS80226.1 MAG: aconitate hydratase [Methanomassiliicoccales archaeon Mx-03] diamond 249 139 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales     Methanomassiliicoccales archaeon Mx-03
26909079 26909079 PRJNA1067370_P_NODE_62962_length_275_cov_1.524752_g62413_i0 PRJNA1067370 62962 275 1.524752 4.193068 Methanomassiliicoccales archaeon 1906667 Archaea Archaea 57 5.47e-7   NR HUV24809.1 1906667 g62413 i0 36.8 0.949090909090909 87 54 94.9 1 270 10 1897 1982 HUV24809.1 right-handed parallel beta-helix repeat-containing protein [Methanomassiliicoccales archaeon] diamond 261 57 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales     Methanomassiliicoccales archaeon
30983679 30983679 PRJNA1067370_P_NODE_70674_length_263_cov_2.589474_g70125_i0 PRJNA1067370 70674 263 2.589474 6.81031662 Candidatus Poseidoniales archaeon 2163009 Archaea Archaea 47.8 8.47e-4   NR MEL0190435.1 2163009 g70125 i0 35.6 0.992395437262357 87 42 91.3 3 6 245 992 1071 MEL0190435.1 hypothetical protein [Candidatus Poseidoniales archaeon] diamond 261 47.8 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;