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contig_metadata

28 rows where bioproject = "PRJNA1067370" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 28 ✖

bioproject 1

  • PRJNA1067370 · 28 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7391028 7391028 PRJNA1067370_P_NODE_84306_length_250_cov_0.870056_g83757_i0 PRJNA1067370 84306 250 0.870056 2.17514 Methanomassiliicoccales archaeon Mx- 1906667 Archaea Archaea 139 6.120000000000001e-36   NR TQS80226.1 1820006 g83757 i0 79.5 0.996 83 17 99.6 0 249 1 252 334 TQS80226.1 MAG: aconitate hydratase [Methanomassiliicoccales archaeon Mx-03] diamond 249 139 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales     Methanomassiliicoccales archaeon Mx-03
12934921 12934921 PRJNA1067370_P_NODE_90811_length_248_cov_0.880000_g90262_i0 PRJNA1067370 90811 248 0.88 2.1824 Halococcus dombrowskii 179637 Archaea Archaea 396 9e-106   NTclustered gi|2221489803|gb|CP095005.1| 179637 g90262 i0 95.547 43.2701612903226 247 11 99 0 2 248 866359 866113 Halococcus dombrowskii strain H4 chromosome, complete genome blastn 10731 396 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus dombrowskii
15483419 15483419 PRJNA1067370_P_NODE_1593_length_1279_cov_4.396352_g1305_i0 PRJNA1067370 1593 1279 4.396352 56.22934208 Methanobacteriaceae archaeon 2099680 Archaea Archaea 462 2.789999999999999e-158   NR MBX7076500.1 2099680 g1305 i0 61.7 0.881939014855356 376 143 88.2 1 1130 3 12 386 MBX7076500.1 elongation factor Tu [Methanobacteriaceae archaeon] diamond 1128 462 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   Methanobacteriaceae archaeon
21857920 21857920 PRJNA1067370_P_NODE_81098_length_251_cov_0.865169_g80549_i0 PRJNA1067370 81098 251 0.865169 2.17157419 Methanosarcina barkeri 2208 Archaea Archaea 54.7 0.006   NTclustered gi|805384997|gb|CP009517.1| 1434107 g80549 i0 96.97 0.131474103585657 33 0 13 1 67 99 3913505 3913474 Methanosarcina barkeri 3, complete genome blastn 33 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina barkeri
21858073 21858073 PRJNA1067370_P_NODE_99978_length_245_cov_0.895349_g99429_i0 PRJNA1067370 99978 245 0.895349 2.19360505 Halosimplex aquaticum 3026162 Archaea Archaea 52.8 0.022   NTclustered gi|2446562038|gb|CP118158.1| 3026162 g99429 i0 100 0.114285714285714 28 0 11 0 29 56 3166077 3166104 Halosimplex aquaticum strain XZYJT29 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halosimplex Halosimplex aquaticum
26909079 26909079 PRJNA1067370_P_NODE_62962_length_275_cov_1.524752_g62413_i0 PRJNA1067370 62962 275 1.524752 4.193068 Methanomassiliicoccales archaeon 1906667 Archaea Archaea 57 5.47e-7   NR HUV24809.1 1906667 g62413 i0 36.8 0.949090909090909 87 54 94.9 1 270 10 1897 1982 HUV24809.1 right-handed parallel beta-helix repeat-containing protein [Methanomassiliicoccales archaeon] diamond 261 57 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales     Methanomassiliicoccales archaeon
26940605 26940605 PRJNA1067370_P_NODE_84802_length_250_cov_0.870056_g84253_i0 PRJNA1067370 84802 250 0.870056 2.17514 Halobaculum sp. MBLA 1891221 Archaea Archaea 42.7 0.0395   NR WP_370900125.1 3079933 g84253 i0 45.8 0.576 48 23 54 1 141 7 66 113 WP_370900125.1 hypothetical protein [Halobaculum sp. MBLA0143] diamond 144 42.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halobaculum Halobaculum sp. MBLA0143
26972162 26972162 PRJNA1067370_P_NODE_113102_length_241_cov_0.916667_g112553_i0 PRJNA1067370 113102 241 0.916667 2.20916747 Natronoarchaeum mannanilyticum 926360 Archaea Archaea 46.6 0.00154   NR WP_343774596.1 926360 g112553 i0 41.2 0.846473029045643 68 27 84.6 2 18 221 251 305 WP_343774596.1 cbb3-type cytochrome c oxidase subunit I [Natronoarchaeum mannanilyticum] diamond 204 46.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronoarchaeaceae Natronoarchaeum Natronoarchaeum mannanilyticum
27153227 27153227 PRJNA1067370_P_NODE_30502_length_353_cov_1.500000_g29954_i0 PRJNA1067370 30502 353 1.5 5.295 root 1 Root_unresolved Root_unresolved 46.6 0.00334   NR WP_011018895.1 2320 g29954 i0 32.4 5.01416430594901 108 45 90.1 3 32 349 12 93 WP_011018895.1 CBS domain-containing protein [Methanopyrus kandleri] diamond 1770 47 0.991489361702128 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanopyri Methanopyrales Methanopyraceae Methanopyrus Methanopyrus kandleri
27446713 27446713 PRJNA1067370_P_NODE_73843_length_259_cov_1.241935_g73294_i0 PRJNA1067370 73843 259 1.241935 3.21661165 candidate division MSBL1 archaeon SCGC-AAA382C18 1698281 Archaea Archaea 102 1.4399999999999994e-23   NR KXB07166.1 1698281 g73294 i0 60.8 1.65637065637066 79 29 89.2 1 234 4 1 79 KXB07166.1 methionine sulfoxide reductase [candidate division MSBL1 archaeon SCGC-AAA382C18] diamond 429 102 1 Archaea candidate division MSBL1 Methanobacteriati Methanobacteriota         candidate division MSBL1 archaeon SCGC-AAA382C18
27477988 27477988 PRJNA1067370_P_NODE_41023_length_316_cov_1.399177_g40475_i0 PRJNA1067370 41023 316 1.399177 4.42139932 Methanomicrobiales archaeon HGW-Methanomicrobiales-2 2013818 Archaea Archaea 54.3 7.63e-6   NR PKL62973.1 2013818 g40475 i0 35.4 0.911392405063291 96 59 89.2 3 22 303 41 135 PKL62973.1 MAG: hypothetical protein CVV31_03005 [Methanomicrobiales archaeon HGW-Methanomicrobiales-2] diamond 288 54.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales     Methanomicrobiales archaeon HGW-Methanomicrobiales-2
27983129 27983129 PRJNA1067370_P_NODE_11665_length_535_cov_1.086580_g11121_i0 PRJNA1067370 11665 535 1.08658 5.813203 Methanomicrobiales archaeon HGW-Methanomicrobiales-1 2013817 Archaea Archaea 48.9 0.00264   NR PKL69940.1 2013817 g11121 i0 36.4 0.6 107 47 58.9 6 381 67 20 107 PKL69940.1 MAG: hypothetical protein CVV30_00775 [Methanomicrobiales archaeon HGW-Methanomicrobiales-1] diamond 321 48.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales     Methanomicrobiales archaeon HGW-Methanomicrobiales-1
28172563 28172563 PRJNA1067370_P_NODE_66306_length_270_cov_1.563452_g65757_i0 PRJNA1067370 66306 270 1.563452 4.2213204 Natronomonas marina 2961939 Archaea Archaea 48.9 2.96e-4   NR WP_254839309.1 2961939 g65757 i0 39.6 0.588888888888889 53 32 58.9 0 111 269 216 268 WP_254839309.1 sensor domain-containing protein [Natronomonas marina] diamond 159 48.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Natronomonas Natronomonas marina
28362007 28362007 PRJNA1067370_P_NODE_59606_length_280_cov_1.859903_g59057_i0 PRJNA1067370 59606 280 1.859903 5.2077284 Candidatus Methanophaga sp. ANME-1 ERB7 2759913 Archaea Archaea 53.1 4.31e-6   NR QNO57908.1 2759913 g59057 i0 41.9 0.664285714285714 62 32 66.4 2 279 94 79 136 QNO57908.1 hypothetical protein DNDHECJJ_00022 [Candidatus Methanophaga sp. ANME-1 ERB7] diamond 186 53.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Candidatus Methanophagales Candidatus Methanophagaceae Candidatus Methanophaga Candidatus Methanophaga sp. ANME-1 ERB7
28732709 28732709 PRJNA1067370_P_NODE_89427_length_248_cov_0.880000_g88878_i0 PRJNA1067370 89427 248 0.88 2.1824 root 1 Root_unresolved Root_unresolved 47.8 5.45e-4   NR MFB6078523.1 2022601 g88878 i0 35.4 1.76612903225806 65 42 78.6 0 208 14 121 185 MFB6078523.1 DUF4397 domain-containing protein [Halarchaeum sp.] diamond 438 47.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halarchaeum Halarchaeum sp.
28741003 28741003 PRJNA1067370_P_NODE_77207_length_254_cov_1.276243_g76658_i0 PRJNA1067370 77207 254 1.276243 3.24165722 Methanobacteriota archaeon 2026739 Archaea Archaea 70.9 5.25e-12   NR MDQ1253007.1 2026739 g76658 i0 36.7 1.85433070866142 90 46 93.3 2 15 251 37 126 MDQ1253007.1 6-bladed beta-propeller [Methanobacteriota archaeon] diamond 471 70.9 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
29458533 29458533 PRJNA1067370_P_NODE_66370_length_270_cov_1.487310_g65821_i0 PRJNA1067370 66370 270 1.48731 4.015737 Methanobacteriati 3366610 Archaea Archaea 72.8 1.12e-12   NR MDD1704293.1 2052170 g65821 i0 48.5 5.65555555555556 66 32 71.1 1 211 20 2 67 MDD1704293.1 molecular chaperone DnaJ [Methanoregula sp.] diamond 1527 72.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula Methanoregula sp.
29593087 29593087 PRJNA1067370_P_NODE_55390_length_287_cov_1.079439_g54841_i0 PRJNA1067370 55390 287 1.079439 3.09798993 uncultured Methanobrevibacter sp. 253161 Archaea Archaea 44.7 0.0118   NR WP_295609040.1 253161 g54841 i0 31.3 1.4006968641115 67 43 70 1 17 217 215 278 WP_295609040.1 cation diffusion facilitator family transporter [uncultured Methanobrevibacter sp.] diamond 402 44.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter uncultured Methanobrevibacter sp.
29846034 29846034 PRJNA1067370_P_NODE_113551_length_241_cov_0.916667_g113002_i0 PRJNA1067370 113551 241 0.916667 2.20916747 Candidatus Methanoperedens sp. 2032688 Archaea Archaea 50.1 9.5e-5   NR HWR98175.1 2032688 g113002 i0 43.5 1.64315352697095 46 26 57.3 0 178 41 466 511 HWR98175.1 Ser-Thr-rich GPI-anchored membrane family protein [Candidatus Methanoperedens sp.] diamond 396 50.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Candidatus Methanoperedentaceae Candidatus Methanoperedens Candidatus Methanoperedens sp.
30983679 30983679 PRJNA1067370_P_NODE_70674_length_263_cov_2.589474_g70125_i0 PRJNA1067370 70674 263 2.589474 6.81031662 Candidatus Poseidoniales archaeon 2163009 Archaea Archaea 47.8 8.47e-4   NR MEL0190435.1 2163009 g70125 i0 35.6 0.992395437262357 87 42 91.3 3 6 245 992 1071 MEL0190435.1 hypothetical protein [Candidatus Poseidoniales archaeon] diamond 261 47.8 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon
31046958 31046958 PRJNA1067370_P_NODE_42835_length_311_cov_2.042017_g42287_i0 PRJNA1067370 42835 311 2.042017 6.35067287 uncultured Methanomethylovorans sp. 183759 Archaea Archaea 85.9 1.35e-17   NR WP_321418046.1 183759 g42287 i0 42.9 0.945337620578778 98 56 94.5 0 296 3 179 276 WP_321418046.1 GNAT family N-acetyltransferase [uncultured Methanomethylovorans sp.] diamond 294 85.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanomethylovorans uncultured Methanomethylovorans sp.
31101375 31101375 PRJNA1067370_P_NODE_41555_length_315_cov_0.917355_g41007_i0 PRJNA1067370 41555 315 0.917355 2.88966825 root 1 Root_unresolved Root_unresolved 71.6 6.09e-12   NR PSP86161.1 1919168 g41007 i0 70 5.33333333333333 40 12 38.1 0 314 195 345 384 PSP86161.1 MAG: tyramine oxidase [Halobacteriales archaeon QS_1_68_17] diamond 1680 72 0.994444444444444 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales     Halobacteriales archaeon QS_1_68_17
31426030 31426030 PRJNA1067370_P_NODE_57236_length_284_cov_1.317536_g56687_i0 PRJNA1067370 57236 284 1.317536 3.74180224 Methanocaldococcus indicus 213231 Archaea Archaea 75.5 1.45e-13   NR XMY58590.1 213231 g56687 i0 39.4 2.97887323943662 94 57 99.3 0 282 1 26 119 XMY58590.1 AAA family ATPase [Methanocaldococcus indicus] diamond 846 75.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanocaldococcaceae Methanocaldococcus Methanocaldococcus indicus
31678963 31678963 PRJNA1067370_P_NODE_56117_length_286_cov_1.084507_g55568_i0 PRJNA1067370 56117 286 1.084507 3.10169002 Methanobrevibacter ruminantium 83816 Archaea Archaea 51.6 4.78e-5   NR WP_304163574.1 83816 g55568 i0 37 1.6993006993007 81 40 80.8 2 263 33 185 258 WP_304163574.1 beta strand repeat-containing protein [Methanobrevibacter ruminantium] diamond 486 51.6 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter ruminantium
32493510 32493510 PRJNA1067370_P_NODE_77019_length_254_cov_1.618785_g76470_i0 PRJNA1067370 77019 254 1.618785 4.1117139 root 1 Root_unresolved Root_unresolved 64.3 5.63e-10   NR MCX6674311.1 90426 g76470 i0 57.1 1.42913385826772 42 18 49.6 0 11 136 169 210 MCX6674311.1 hypothetical protein [Methanothrix sp.] diamond 363 64.7 0.993817619783617 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
32596506 32596506 PRJNA1067370_P_NODE_10620_length_559_cov_1.049383_g10080_i0 PRJNA1067370 10620 559 1.049383 5.86605097 Methanoculleus sp. 90427 Archaea Archaea 63.5 4.91e-8   NR HOI13930.1 90427 g10080 i0 33.6 3.71377459749553 140 63 74.6 3 422 6 115 225 HOI13930.1 kelch repeat-containing protein [Methanoculleus sp.] diamond 2076 63.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanoculleus Methanoculleus sp.
32619573 32619573 PRJNA1067370_P_NODE_101980_length_245_cov_0.895349_g101431_i0 PRJNA1067370 101980 245 0.895349 2.19360505 root 1 Root_unresolved Root_unresolved 44.3 0.0112   NR MDO9324427.1 2052170 g101431 i0 44.4 1.57959183673469 54 29 64.9 1 179 21 96 149 MDO9324427.1 TIGR03768 family metallophosphoesterase [Methanoregula sp.] diamond 387 44.7 0.991051454138702 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula Methanoregula sp.
32871535 32871535 PRJNA1067370_P_NODE_44880_length_310_cov_0.974684_g44332_i0 PRJNA1067370 44880 310 0.974684 3.0215204 root 1 Root_unresolved Root_unresolved 55.1 3.85e-6   NR WP_292800363.1 66852 g44332 i0 30.2 2.09032258064516 106 57 96.8 3 302 3 688 782 WP_292800363.1 hypothetical protein [Methanobrevibacter sp.] diamond 648 55.1 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;