RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1067370" and tax_clade = "Pithoviruses"

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tax_superkingdom 1

tax_clade 1

  • Pithoviruses · 2 ✖

bioproject 1

  • PRJNA1067370 · 2 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30478008 30478008 PRJNA1067370_P_NODE_115853_length_239_cov_2.228916_g115304_i0 PRJNA1067370 115853 239 2.228916 5.32710924 Pithovirus LCPAC2 2506591 Viruses Viruses 106 7.6299999999999995e-25   NR QBK91013.1 2506591 g115304 i0 65.8 0.95397489539749 76 26 95.4 0 10 237 281 356 QBK91013.1 MAG: protein of unknown function DUF4246 [Pithovirus LCPAC201] diamond 228 106 1 Viruses Pithoviruses             Pithovirus LCPAC201
31141051 31141051 PRJNA1067370_P_NODE_42495_length_312_cov_1.230126_g41947_i0 PRJNA1067370 42495 312 1.230126 3.83799312 Solumvirus sp. 2487773 Viruses Viruses 53.9 5.68e-6   NR AYV86227.1 2487773 g41947 i0 47.1 0.653846153846154 68 33 62.5 1 116 310 28 95 AYV86227.1 MAG: hypothetical protein Solumvirus2_34 [Solumvirus sp.] diamond 204 53.9 1 Viruses Pithoviruses             Solumvirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;