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contig_metadata

27 rows where bioproject = "PRJNA1067370", tax_clade = "FCB group" and tax_phylum = "Gemmatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Gemmatimonadota · 27 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 27 ✖

bioproject 1

  • PRJNA1067370 · 27 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1455497 1455497 PRJNA1067370_P_NODE_32462_length_345_cov_1.702206_g31914_i0 PRJNA1067370 32462 345 1.702206 5.8726107 uncultured Gemmatimonadales bacterium 412054 Bacteria Bacteria 322 2.25e-83   NTclustered gi|2874254107|emb|OY970192.1| 412054 g31914 i0 90.04 13.4057971014493 251 21 72 4 1 250 1593422 1593669 MAG: uncultured Gemmatimonadales bacterium isolate MFD01721.bin.c.5 genome assembly, chromosome: 1 blastn 4625 322 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     uncultured Gemmatimonadales bacterium
2731059 2731059 PRJNA1067370_P_NODE_106763_length_243_cov_0.905882_g106214_i0 PRJNA1067370 106763 243 0.905882 2.20129326 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 100 7.71e-17   NTclustered gi|2108049360|gb|CP070758.1| 2026742 g106214 i0 93.939 1.34567901234568 66 4 27 0 178 243 4860435 4860500 MAG: Gemmatimonadetes bacterium isolate bin29 chromosome blastn 327 100 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
9108399 9108399 PRJNA1067370_P_NODE_33968_length_339_cov_1.687970_g33420_i0 PRJNA1067370 33968 339 1.68797 5.7222183 uncultured Gemmatimonadales bacterium 412054 Bacteria Bacteria 438 2.1e-118   NTclustered gi|2874253728|emb|OY969570.1| 412054 g33420 i0 90.237 130.407079646018 338 30 99 3 1 337 172400 172065 MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 blastn 44208 438 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     uncultured Gemmatimonadales bacterium
16757739 16757739 PRJNA1067370_P_NODE_34274_length_338_cov_1.452830_g33726_i0 PRJNA1067370 34274 338 1.45283 4.9105654 Gemmatirosa kalamazoonensis 861299 Bacteria Bacteria 398 3.559999999999998e-106   NTclustered gi|575456455|gb|CP007128.1| 861299 g33726 i0 88.235 90.1360946745562 340 31 99 7 2 338 3042808 3042475 Gemmatirosa kalamazoonesis strain KBS708, complete genome blastn 30466 398 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae Gemmatirosa Gemmatirosa kalamazoonensis
18864710 18864710 PRJNA1067370_P_NODE_108215_length_243_cov_0.905882_g107666_i0 PRJNA1067370 108215 243 0.905882 2.20129326 Longimicrobium sp. 2029185 Bacteria Bacteria 147 6.77e-44   NR WP_329684109.1 2029185 g107666 i0 92.5 0.987654320987654 80 6 98.8 0 2 241 42 121 WP_329684109.1 response regulator [Longimicrobium sp.] diamond 240 147 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales Longimicrobiaceae Longimicrobium Longimicrobium sp.
26741957 26741957 PRJNA1067370_P_NODE_1741_length_1234_cov_14.922481_g1439_i0 PRJNA1067370 1741 1234 14.922481 184.14341554 Bacteria 2 Bacteria Bacteria 230 1.65e-64   NR MDQ8165240.1 2026742 g1439 i0 46.4 2.78606158833063 267 127 62.7 6 1123 350 255 514 MDQ8165240.1 fibro-slime domain-containing protein [Gemmatimonadota bacterium] diamond 3438 231 0.995670995670996 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
26805651 26805651 PRJNA1067370_P_NODE_1281_length_1385_cov_3.263720_g1027_i0 PRJNA1067370 1281 1385 3.26372 45.202522 Gemmatimonadota 142182 Bacteria Bacteria 111 3.179999999999999e-23   NR HKH91170.1 2026741 g1027 i0 54.3 1.24332129963899 116 53 25.1 0 760 413 192 307 HKH91170.1 DUF2382 domain-containing protein [Gemmatimonadaceae bacterium] diamond 1722 111 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
27225031 27225031 PRJNA1067370_P_NODE_30143_length_355_cov_1.074468_g29595_i0 PRJNA1067370 30143 355 1.074468 3.8143614 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 80.9 4.9e-15   NR MBM3885362.1 2026742 g29595 i0 36.5 3.86197183098592 115 66 96.3 2 343 2 233 341 MBM3885362.1 alkaline phosphatase family protein [Gemmatimonadota bacterium] diamond 1371 80.9 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
27320195 27320195 PRJNA1067370_P_NODE_6923_length_677_cov_9.460265_g6409_i0 PRJNA1067370 6923 677 9.460265 64.04599405 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 90.5 1.84e-18   NR MDB4892592.1 2026742 g6409 i0 43.8 2.84490398818316 144 66 62.9 5 151 576 40 170 MDB4892592.1 hypothetical protein [Gemmatimonadota bacterium] diamond 1926 90.5 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
27667569 27667569 PRJNA1067370_P_NODE_116484_length_234_cov_4.273292_g115935_i0 PRJNA1067370 116484 234 4.273292 9.99950328 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 42.4 0.0235   NR HEY0350525.1 2448054 g115935 i0 40.4 0.666666666666667 52 30 65.4 1 11 163 32 83 HEY0350525.1 PTS sugar transporter subunit IIA [Gemmatimonadales bacterium] diamond 156 42.4 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
27762387 27762387 PRJNA1067370_P_NODE_116084_length_237_cov_2.591463_g115535_i0 PRJNA1067370 116084 237 2.591463 6.14176731 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 60.5 7.97e-9   NR MBA2688246.1 2026741 g115535 i0 45.3 7.45569620253165 75 40 93.7 1 226 5 93 167 MBA2688246.1 uridine kinase [Gemmatimonadaceae bacterium] diamond 1767 60.5 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
28614758 28614758 PRJNA1067370_P_NODE_76847_length_254_cov_2.154696_g76298_i0 PRJNA1067370 76847 254 2.154696 5.47292784 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 56.2 7.54e-7   NR MBT4503870.1 2026742 g76298 i0 58.1 1.0511811023622 43 18 50.8 0 14 142 412 454 MBT4503870.1 WD40 repeat domain-containing protein [Gemmatimonadota bacterium] diamond 267 56.2 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
28835647 28835647 PRJNA1067370_P_NODE_23588_length_392_cov_1.175549_g23040_i0 PRJNA1067370 23588 392 1.175549 4.60815208 Longimicrobiales bacterium 2910168 Bacteria Bacteria 110 2.73e-25   NR HET9986710.1 2910168 g23040 i0 46.5 3.01530612244898 129 66 98.7 1 1 387 255 380 HET9986710.1 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein [Longimicrobiales bacterium] diamond 1182 110 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales     Longimicrobiales bacterium
29088356 29088356 PRJNA1067370_P_NODE_1728_length_1237_cov_5.863402_g1426_i0 PRJNA1067370 1728 1237 5.863402 72.53028274 Longimicrobium sp. 2029185 Bacteria Bacteria 93.6 1.45e-17   NR HEX6372403.1 2029185 g1426 i0 49.1 0.569927243330639 114 57 27.4 1 539 877 135 248 HEX6372403.1 DUF2382 domain-containing protein [Longimicrobium sp.] diamond 705 93.6 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales Longimicrobiaceae Longimicrobium Longimicrobium sp.
29237939 29237939 PRJNA1067370_P_NODE_1249_length_1402_cov_5.799097_g998_i0 PRJNA1067370 1249 1402 5.799097 81.30333994 Gemmatimonadota 142182 Bacteria Bacteria 86.3 7.72e-15   NR HEX6372403.1 2029185 g998 i0 42.7 1.15335235378031 131 74 27.8 1 785 396 135 265 HEX6372403.1 DUF2382 domain-containing protein [Longimicrobium sp.] diamond 1617 86.3 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales Longimicrobiaceae Longimicrobium Longimicrobium sp.
29372509 29372509 PRJNA1067370_P_NODE_57329_length_284_cov_1.175355_g56780_i0 PRJNA1067370 57329 284 1.175355 3.3380082 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 81.6 2.89e-16   NR MBW3572569.1 2026742 g56780 i0 49 2.02816901408451 98 39 97.2 2 1 276 142 234 MBW3572569.1 DUF2382 domain-containing protein [Gemmatimonadota bacterium] diamond 576 81.6 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
29814457 29814457 PRJNA1067370_P_NODE_94851_length_247_cov_0.885057_g94302_i0 PRJNA1067370 94851 247 0.885057 2.18609079 Longimicrobium sp. 2029185 Bacteria Bacteria 52.8 3.95e-6   NR HEX6369335.1 2029185 g94302 i0 67.4 1.04453441295547 43 14 52.2 0 130 2 1 43 HEX6369335.1 amino acid permease [Longimicrobium sp.] diamond 258 52.8 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales Longimicrobiaceae Longimicrobium Longimicrobium sp.
29877730 29877730 PRJNA1067370_P_NODE_107451_length_243_cov_0.905882_g106902_i0 PRJNA1067370 107451 243 0.905882 2.20129326 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 58.9 7.11e-8   NR MDP1860145.1 2026741 g106902 i0 43.5 2.81481481481481 69 37 85.2 1 208 2 306 372 MDP1860145.1 GMC family oxidoreductase N-terminal domain-containing protein [Gemmatimonadaceae bacterium] diamond 684 58.9 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
29972474 29972474 PRJNA1067370_P_NODE_91811_length_248_cov_0.880000_g91262_i0 PRJNA1067370 91811 248 0.88 2.1824 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 48.5 3.64e-4   NR MEZ0333580.1 2448054 g91262 i0 36.7 3.22983870967742 79 46 90.7 2 23 247 568 646 MEZ0333580.1 Ig-like domain-containing protein [Gemmatimonadales bacterium] diamond 801 48.5 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
30248675 30248675 PRJNA1067370_P_NODE_38432_length_324_cov_1.215139_g37884_i0 PRJNA1067370 38432 324 1.215139 3.93705036 FCB group 1783270 Bacteria Bacteria 144 1.0099999999999999e-38   NR HSB53493.1 2448054 g37884 i0 65.7 9.94444444444444 108 37 100 0 1 324 279 386 HSB53493.1 aspartate aminotransferase family protein [Gemmatimonadales bacterium] diamond 3222 144 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
30352070 30352070 PRJNA1067370_P_NODE_105772_length_243_cov_1.705882_g105223_i0 PRJNA1067370 105772 243 1.705882 4.14529326 Longimicrobium sp. 2029185 Bacteria Bacteria 131 2.17e-34   NR WP_331124947.1 2029185 g105223 i0 90.3 0.888888888888889 72 7 88.9 0 3 218 340 411 WP_331124947.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [Longimicrobium sp.] diamond 216 131 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales Longimicrobiaceae Longimicrobium Longimicrobium sp.
30817165 30817165 PRJNA1067370_P_NODE_63094_length_275_cov_1.376238_g62545_i0 PRJNA1067370 63094 275 1.376238 3.7846545 Pseudomonadati 3379134 Bacteria Bacteria 64.3 9.54e-10   NR MBT3345964.1 2026742 g62545 i0 44.4 2.56363636363636 72 31 78.5 2 217 2 200 262 MBT3345964.1 alpha/beta hydrolase [Gemmatimonadota bacterium] diamond 705 64.3 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
30920520 30920520 PRJNA1067370_P_NODE_6474_length_698_cov_14.595200_g5965_i0 PRJNA1067370 6474 698 14.5952 101.874496 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 90.5 2.18e-18   NR MDB4892592.1 2026742 g5965 i0 42 0.644699140401146 150 75 64.5 5 591 142 33 170 MDB4892592.1 hypothetical protein [Gemmatimonadota bacterium] diamond 450 90.5 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
31457787 31457787 PRJNA1067370_P_NODE_29036_length_360_cov_1.435540_g28488_i0 PRJNA1067370 29036 360 1.43554 5.167944 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 72 1.11e-12   NR MBC7842225.1 2026741 g28488 i0 47.9 2.46666666666667 94 42 75.8 3 280 8 28 117 MBC7842225.1 CHRD domain-containing protein [Gemmatimonadaceae bacterium] diamond 888 72 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
31868826 31868826 PRJNA1067370_P_NODE_997_length_1512_cov_6.647672_g770_i0 PRJNA1067370 997 1512 6.647672 100.51280064 Longimicrobium sp. 2029185 Bacteria Bacteria 97.4 1.32e-18   NR HEX2210215.1 2029185 g770 i0 47.4 0.48015873015873 114 59 22.4 1 849 511 135 248 HEX2210215.1 DUF2382 domain-containing protein [Longimicrobium sp.] diamond 726 97.4 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales Longimicrobiaceae Longimicrobium Longimicrobium sp.
32533602 32533602 PRJNA1067370_P_NODE_88859_length_248_cov_1.742857_g88310_i0 PRJNA1067370 88859 248 1.742857 4.32228536 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 42.4 0.0429   NR MBR44575.1 2026742 g88310 i0 24 0.907258064516129 75 53 85.9 1 234 22 56 130 MBR44575.1 hypothetical protein [Gemmatimonadota bacterium] diamond 225 42.4 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
32753940 32753940 PRJNA1067370_P_NODE_89700_length_248_cov_0.880000_g89151_i0 PRJNA1067370 89700 248 0.88 2.1824 Longimicrobium sp. 2029185 Bacteria Bacteria 67.8 1.8e-11   NR HEU4454846.1 2029185 g89151 i0 87.8 0.495967741935484 41 5 49.6 0 1 123 184 224 HEU4454846.1 PHP domain-containing protein [Longimicrobium sp.] diamond 123 67.8 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales Longimicrobiaceae Longimicrobium Longimicrobium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;