contig_metadata
19 rows where bioproject = "PRJNA1065838" and tax_phylum = "Bacteroidota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1012631 | 1012631 | PRJNA1065838_S_NODE_33061_length_167_cov_0.864407_g32959_i0 | PRJNA1065838 | 33061 | 167 | 0.864407 | 1.44355969 | Bacteroidota | 976 | Bacteria | Bacteria | 309 | 7.53e-80 | NTclustered | gi|1519569220|gb|CP033933.1| | 421525 | g32959 | i0 | 100 | 3.93413173652695 | 167 | 0 | 100 | 0 | 1 | 167 | 145080 | 145246 | Kaistella haifensis strain G0079 chromosome, complete genome | blastn | 657 | 309 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Kaistella | Kaistella haifensis | |
| 4006538 | 4006538 | PRJNA1065838_S_NODE_32284_length_168_cov_0.907563_g32182_i0 | PRJNA1065838 | 32284 | 168 | 0.907563 | 1.52470584 | Epilithonimonas vandammei | 2487072 | Bacteria | Bacteria | 237 | 3.63e-58 | NTclustered | gi|1527200821|gb|CP034160.1| | 2487072 | g32182 | i0 | 92.308 | 2.00595238095238 | 169 | 9 | 99 | 4 | 2 | 168 | 2650550 | 2650384 | Epilithonimonas vandammei strain H6466 chromosome, complete genome | blastn | 337 | 237 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Epilithonimonas | Epilithonimonas vandammei | |
| 5282983 | 5282983 | PRJNA1065838_S_NODE_7265_length_280_cov_2.134199_g7163_i0 | PRJNA1065838 | 7265 | 280 | 2.134199 | 5.9757572 | Bacteroides fragilis | 817 | Bacteria | Bacteria | 54.7 | 0.007 | NTclustered | gi|2323343196|gb|CP083688.1| | 817 | g7163 | i0 | 100 | 1.40357142857143 | 29 | 0 | 10 | 0 | 252 | 280 | 4505790 | 4505818 | Bacteroides fragilis strain DH4096B chromosome | blastn | 393 | 54.7 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidaceae | Bacteroides | Bacteroides fragilis | |
| 6115991 | 6115991 | PRJNA1065838_S_NODE_9125_length_256_cov_0.990338_g9023_i0 | PRJNA1065838 | 9125 | 256 | 0.990338 | 2.53526528 | Weeksellaceae | 2762318 | Bacteria | Bacteria | 473 | 4.189999999999999e-129 | NTclustered | gi|1497470369|gb|CP023540.1| | 2039166 | g9023 | i0 | 100 | 76.46484375 | 256 | 0 | 100 | 0 | 1 | 256 | 899419 | 899674 | Chryseobacterium sp. 6424 chromosome, complete genome | blastn | 19575 | 473 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Chryseobacterium | Chryseobacterium sp. 6424 | |
| 9107617 | 9107617 | PRJNA1065838_S_NODE_20348_length_201_cov_1.006579_g20246_i0 | PRJNA1065838 | 20348 | 201 | 1.006579 | 2.02322379 | Epilithonimonas vandammei | 2487072 | Bacteria | Bacteria | 322 | 1.21e-83 | NTclustered | gi|1527187866|gb|CP034161.1| | 2487072 | g20246 | i0 | 95.522 | 80.4228855721393 | 201 | 9 | 100 | 0 | 1 | 201 | 588436 | 588636 | Epilithonimonas vandammei strain F5649 chromosome, complete genome | blastn | 16165 | 322 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Epilithonimonas | Epilithonimonas vandammei | |
| 11216044 | 11216044 | PRJNA1065838_S_NODE_34429_length_165_cov_0.870690_g34327_i0 | PRJNA1065838 | 34429 | 165 | 0.87069 | 1.4366385 | Weeksellaceae | 2762318 | Bacteria | Bacteria | 270 | 3.4999999999999993e-68 | NTclustered | gi|2463614404|gb|CP120209.1| | 253 | g34327 | i0 | 96.341 | 96.1030303030303 | 164 | 6 | 99 | 0 | 1 | 164 | 2164445 | 2164282 | Chryseobacterium indologenes strain Ery-6B chromosome, complete genome | blastn | 15857 | 270 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Chryseobacterium | Chryseobacterium indologenes | |
| 11658542 | 11658542 | PRJNA1065838_S_NODE_11470_length_234_cov_2.156757_g11368_i0 | PRJNA1065838 | 11470 | 234 | 2.156757 | 5.04681138 | Epilithonimonas vandammei | 2487072 | Bacteria | Bacteria | 399 | 6.499999999999999e-107 | NTclustered | gi|1527200821|gb|CP034160.1| | 2487072 | g11368 | i0 | 97.436 | 17.457264957265 | 234 | 6 | 100 | 0 | 1 | 234 | 2759203 | 2758970 | Epilithonimonas vandammei strain H6466 chromosome, complete genome | blastn | 4085 | 399 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Epilithonimonas | Epilithonimonas vandammei | |
| 11658738 | 11658738 | PRJNA1065838_S_NODE_36310_length_162_cov_0.920354_g36208_i0 | PRJNA1065838 | 36310 | 162 | 0.920354 | 1.49097348 | Hymenobacter volaticus | 2932254 | Bacteria | Bacteria | 209 | 7.56e-50 | NTclustered | gi|2221929187|gb|CP095061.1| | 2932254 | g36208 | i0 | 90.062 | 10.9938271604938 | 161 | 16 | 99 | 0 | 1 | 161 | 1612403 | 1612563 | Hymenobacter volaticus strain 5420 S-77 chromosome, complete genome | blastn | 1781 | 209 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Hymenobacteraceae | Hymenobacter | Hymenobacter volaticus | |
| 12933860 | 12933860 | PRJNA1065838_S_NODE_34971_length_164_cov_0.904348_g34869_i0 | PRJNA1065838 | 34971 | 164 | 0.904348 | 1.48313072 | Pedobacter aquae | 2605747 | Bacteria | Bacteria | 128 | 2.21e-25 | NTclustered | gi|1733060322|gb|CP043329.1| | 2605747 | g34869 | i0 | 80.864 | 2.41463414634146 | 162 | 31 | 99 | 0 | 3 | 164 | 2140424 | 2140263 | Pedobacter aquae strain CJ43 chromosome, complete genome | blastn | 396 | 128 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Sphingobacteriia | Sphingobacteriales | Sphingobacteriaceae | Pedobacter | Pedobacter aquae | |
| 15040485 | 15040485 | PRJNA1065838_S_NODE_7472_length_277_cov_1.105263_g7370_i0 | PRJNA1065838 | 7472 | 277 | 1.105263 | 3.06157851 | Bacteroidota | 976 | Bacteria | Bacteria | 507 | 4.53e-139 | NTclustered | gi|1943023671|gb|CP065590.1| | 253 | g7370 | i0 | 99.639 | 7.70758122743682 | 277 | 1 | 100 | 0 | 1 | 277 | 2360629 | 2360353 | Chryseobacterium indologenes strain DSM 16777 chromosome, complete genome | blastn | 2135 | 507 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Chryseobacterium | Chryseobacterium indologenes | |
| 16756890 | 16756890 | PRJNA1065838_S_NODE_15794_length_215_cov_0.915663_g15692_i0 | PRJNA1065838 | 15794 | 215 | 0.915663 | 1.96867545 | Epilithonimonas vandammei | 2487072 | Bacteria | Bacteria | 326 | 1.01e-84 | NTclustered | gi|1527187866|gb|CP034161.1| | 2487072 | g15692 | i0 | 97.872 | 1.73488372093023 | 188 | 4 | 87 | 0 | 28 | 215 | 1397196 | 1397009 | Epilithonimonas vandammei strain F5649 chromosome, complete genome | blastn | 373 | 326 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Epilithonimonas | Epilithonimonas vandammei | |
| 18031785 | 18031785 | PRJNA1065838_S_NODE_28575_length_177_cov_0.859375_g28473_i0 | PRJNA1065838 | 28575 | 177 | 0.859375 | 1.52109375 | Epilithonimonas vandammei | 2487072 | Bacteria | Bacteria | 294 | 2.25e-75 | NTclustered | gi|1527200821|gb|CP034160.1| | 2487072 | g28473 | i0 | 96.61 | 3.95480225988701 | 177 | 6 | 100 | 0 | 1 | 177 | 1779589 | 1779413 | Epilithonimonas vandammei strain H6466 chromosome, complete genome | blastn | 700 | 294 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Epilithonimonas | Epilithonimonas vandammei | |
| 18863956 | 18863956 | PRJNA1065838_S_NODE_19035_length_205_cov_1.410256_g18933_i0 | PRJNA1065838 | 19035 | 205 | 1.410256 | 2.8910248 | Weeksellaceae | 2762318 | Bacteria | Bacteria | 377 | 2.6e-100 | NTclustered | gi|1527187866|gb|CP034161.1| | 2487072 | g18933 | i0 | 100 | 32.9560975609756 | 204 | 0 | 99 | 0 | 2 | 205 | 872977 | 873180 | Epilithonimonas vandammei strain F5649 chromosome, complete genome | blastn | 6756 | 379 | 0.994722955145119 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Epilithonimonas | Epilithonimonas vandammei | |
| 21856976 | 21856976 | PRJNA1065838_S_NODE_5298_length_319_cov_1.062963_g5196_i0 | PRJNA1065838 | 5298 | 319 | 1.062963 | 3.39085197 | Chryseobacterium sp. C-71 | 2893882 | Bacteria | Bacteria | 510 | 4.11e-140 | NTclustered | gi|2153927454|gb|CP087131.1| | 2893882 | g5196 | i0 | 97.959 | 4.73354231974922 | 294 | 6 | 92 | 0 | 26 | 319 | 1185399 | 1185106 | Chryseobacterium sp. C-71 chromosome, complete genome | blastn | 1510 | 510 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Chryseobacterium | Chryseobacterium sp. C-71 | |
| 23965081 | 23965081 | PRJNA1065838_S_NODE_35759_length_163_cov_0.885965_g35657_i0 | PRJNA1065838 | 35759 | 163 | 0.885965 | 1.44412295 | Elizabethkingia | 308865 | Bacteria | Bacteria | 291 | 2.64e-74 | NTclustered | gi|1601534959|tpg|BK010610.1| | 1117645 | g35657 | i0 | 98.773 | 99.1411042944785 | 163 | 2 | 100 | 0 | 1 | 163 | 41843 | 41681 | TPA_exp: Elizabethkingia anophelis integrative and conjugative element ICEEaIII(5)_NUHP1 genomic sequence | blastn | 16160 | 291 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Elizabethkingia | Elizabethkingia anophelis | |
| 23965238 | 23965238 | PRJNA1065838_S_NODE_8399_length_265_cov_1.064815_g8297_i0 | PRJNA1065838 | 8399 | 265 | 1.064815 | 2.82175975 | Chryseobacterium | 59732 | Bacteria | Bacteria | 490 | 4.3299999999999986e-134 | NTclustered | gi|2429070341|gb|CP115857.1| | 373672 | g8297 | i0 | 100 | 476.445283018868 | 265 | 0 | 100 | 0 | 1 | 265 | 1758158 | 1757894 | Chryseobacterium gambrini strain PL22-1A chromosome, complete genome | blastn | 126258 | 490 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Chryseobacterium | Chryseobacterium gambrini | |
| 23965272 | 23965272 | PRJNA1065838_S_NODE_9499_length_252_cov_1.729064_g9397_i0 | PRJNA1065838 | 9499 | 252 | 1.729064 | 4.35724128 | Bacteroidota | 976 | Bacteria | Bacteria | 444 | 3.2299999999999996e-120 | NTclustered | gi|1943023671|gb|CP065590.1| | 253 | g9397 | i0 | 98.413 | 6.96428571428571 | 252 | 4 | 100 | 0 | 1 | 252 | 2360715 | 2360966 | Chryseobacterium indologenes strain DSM 16777 chromosome, complete genome | blastn | 1755 | 444 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Chryseobacterium | Chryseobacterium indologenes | |
| 27888280 | 27888280 | PRJNA1065838_S_NODE_17785_length_209_cov_0.975000_g17683_i0 | PRJNA1065838 | 17785 | 209 | 0.975 | 2.03775 | Flavobacterium rhizophilum | 3163296 | Bacteria | Bacteria | 120 | 1.49e-32 | NR | WP_408076268.1 | 3163296 | g17683 | i0 | 100 | 0.904306220095694 | 63 | 0 | 90.4 | 0 | 3 | 191 | 109 | 171 | WP_408076268.1 hypothetical protein, partial [Flavobacterium rhizophilum] | diamond | 189 | 120 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium rhizophilum | |
| 31955296 | 31955296 | PRJNA1065838_S_NODE_24097_length_191_cov_1.098592_g23995_i0 | PRJNA1065838 | 24097 | 191 | 1.098592 | 2.09831072 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 113 | 7.659999999999999e-31 | NR | PAM92647.1 | 2026304 | g23995 | i0 | 100 | 1.63350785340314 | 52 | 0 | 81.7 | 0 | 191 | 36 | 59 | 110 | PAM92647.1 hypothetical protein B4N84_22100, partial [Flavobacterium sp. IR1] | diamond | 312 | 113 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium sp. IR1 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;