RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

17 rows where bioproject = "PRJNA1065838" and tax_phylum = "Ascomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 17 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1065838 · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2287633 2287633 PRJNA1065838_S_NODE_17782_length_209_cov_0.975000_g17680_i0 PRJNA1065838 17782 209 0.975 2.03775 Aureobasidium 5579 Fungi Fungi 387 4.42e-103   NTclustered gi|2105717098|gb|OK360984.1| 5580 g17680 i0 100 101.253588516746 209 0 100 0 1 209 532 324 Aureobasidium pullulans strain PPP41 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 21162 387 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Dothideales Saccotheciaceae Aureobasidium Aureobasidium pullulans
2730568 2730568 PRJNA1065838_S_NODE_25863_length_185_cov_1.875000_g25761_i0 PRJNA1065838 25863 185 1.875 3.46875 Natonodosa speciosa 2201234 Fungi Fungi 298 1.84e-76   NTclustered gi|1394335044|gb|MF380435.1| 2201234 g25761 i0 95.676 103.951351351351 185 8 100 0 1 185 4221 4405 Natonodosa speciosa strain CLM-RV86 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 19231 298 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Xylariales Hypoxylaceae Natonodosa Natonodosa speciosa
4840376 4840376 PRJNA1065838_S_NODE_14164_length_221_cov_1.186047_g14062_i0 PRJNA1065838 14164 221 1.186047 2.62116387 Acremonium 159075 Fungi Fungi 403 4.69e-108   NTclustered gi|480327022|gb|JX535045.1| 1321958 g14062 i0 99.548 104 221 1 100 0 1 221 1546 1766 Acremonium sp. 24 OA-2013 large subunit ribosomal RNA gene, partial sequence blastn 22984 403 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales   Acremonium Acremonium sp. 24 OA-2013
4840515 4840515 PRJNA1065838_S_NODE_24284_length_190_cov_2.333333_g24182_i0 PRJNA1065838 24284 190 2.333333 4.4333327 Ascomycota 4890 Fungi Fungi 351 1.4399999999999997e-92   NTclustered gi|2532687033|gb|OR243761.1| 29917 g24182 i0 100 99.6947368421053 190 0 100 0 1 190 4170 4359 Cladosporium cladosporioides strain DSM 104381 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 18942 351 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
4840626 4840626 PRJNA1065838_S_NODE_31084_length_170_cov_1.636364_g30982_i0 PRJNA1065838 31084 170 1.636364 2.7818188 Parengyodontium 1892809 Fungi Fungi 200 4.8e-47   NTclustered gi|1125812533|ref|NC_032302.1| 37998 g30982 i0 91.216 87.1588235294118 148 11 86 2 1 147 21046 20900 Parengyodontium album voucher ATCC:56482 mitochondrion, complete genome blastn 14817 200 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Cordycipitaceae Parengyodontium Parengyodontium album
6115792 6115792 PRJNA1065838_S_NODE_33725_length_166_cov_0.871795_g33623_i0 PRJNA1065838 33725 166 0.871795 1.4471797 Acremonium 159075 Fungi Fungi 302 1.2500000000000001e-77   NTclustered gi|480327022|gb|JX535045.1| 1321958 g33623 i0 99.398 99.7469879518072 166 1 100 0 1 166 1976 1811 Acremonium sp. 24 OA-2013 large subunit ribosomal RNA gene, partial sequence blastn 16558 302 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales   Acremonium Acremonium sp. 24 OA-2013
12491465 12491465 PRJNA1065838_S_NODE_29650_length_174_cov_1.072000_g29548_i0 PRJNA1065838 29650 174 1.072 1.86528 Eukaryota 2759 Fungi Fungi 322 1.01e-83   NTclustered gi|514829572|gb|KC771883.1| 4929 g29548 i0 100 65.3218390804598 174 0 100 0 1 174 299 472 Meyerozyma guilliermondii strain SNP3S 26S ribosomal RNA gene, partial sequence blastn 11366 322 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Meyerozyma Meyerozyma guilliermondii
16756968 16756968 PRJNA1065838_S_NODE_28454_length_177_cov_1.609375_g28352_i0 PRJNA1065838 28454 177 1.609375 2.84859375 Trichoderma koningiopsis 337941 Fungi Fungi 185 1.4099999999999999e-42   NTclustered gi|1572818423|gb|MK512095.1| 337941 g28352 i0 95.69 67.2485875706215 116 4 66 1 62 177 229 115 Trichoderma koningiopsis isolate S7-1 28S ribosomal RNA gene, partial sequence; 28S-18S ribosomal RNA intergenic spacer, complete sequence; and 18S ribosomal RNA gene, partial sequence blastn 11903 185 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Hypocreaceae Trichoderma Trichoderma koningiopsis
19305655 19305655 PRJNA1065838_S_NODE_19676_length_203_cov_1.324675_g19574_i0 PRJNA1065838 19676 203 1.324675 2.68909025 Sarocladium implicatum 1610689 Fungi Fungi 311 2.6400000000000003e-80   NTclustered gi|761546238|ref|NC_026534.1| 1610689 g19574 i0 96.296 92.3152709359606 189 7 93 0 15 203 1300 1112 Acremonium implicatum mitochondrion, complete genome blastn 18740 311 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Sarocladiaceae Sarocladium Sarocladium implicatum
21414522 21414522 PRJNA1065838_S_NODE_24757_length_189_cov_0.985714_g24655_i0 PRJNA1065838 24757 189 0.985714 1.86299946 Hypocreales 5125 Fungi Fungi 110 9.49e-20   NTclustered gi|1275508361|gb|KY924882.1| 29910 g24655 i0 92.308 17.7830687830688 78 4 40 2 52 127 23916 23993 Tolypocladium inflatum strain ARSEF 9506 mitochondrion, complete genome blastn 3361 111 0.990990990990991 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Ophiocordycipitaceae Tolypocladium Tolypocladium inflatum
21856905 21856905 PRJNA1065838_S_NODE_30718_length_171_cov_1.278689_g30616_i0 PRJNA1065838 30718 171 1.278689 2.18655819 Microdochium trichocladiopsis 1682393 Fungi Fungi 78.7 2.36e-10   NTclustered gi|2185395240|ref|XM_046153483.1| 1682393 g30616 i0 92.727 0.578947368421053 55 3 33 1 108 161 472 418 Microdochium trichocladiopsis ABC transporter (B0I36DRAFT_319956), mRNA blastn 99 78.7 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Xylariales Microdochiaceae Microdochium Microdochium trichocladiopsis
22689452 22689452 PRJNA1065838_S_NODE_33678_length_166_cov_0.871795_g33576_i0 PRJNA1065838 33678 166 0.871795 1.4471797 Cordyceps 45234 Fungi Fungi 224 2.7799999999999995e-54   NTclustered gi|2617469749|emb|OY756929.1| 114497 g33576 i0 91.018 66.789156626506 167 13 100 2 1 166 5800 5965 Cordyceps fumosorosea genome assembly, organelle: mitochondrion blastn 11087 224 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Cordycipitaceae Cordyceps Cordyceps fumosorosea
25238611 25238611 PRJNA1065838_S_NODE_16040_length_214_cov_1.860606_g15938_i0 PRJNA1065838 16040 214 1.860606 3.98169684 Eukaryota 2759 Fungi Fungi 377 2.74e-100   NTclustered gi|2532687033|gb|OR243761.1| 29917 g15938 i0 99.519 97.4158878504673 208 0 97 1 1 208 3897 4103 Cladosporium cladosporioides strain DSM 104381 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 20847 377 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
28425287 28425287 PRJNA1065838_S_NODE_34886_length_164_cov_0.904348_g34784_i0 PRJNA1065838 34886 164 0.904348 1.48313072 Exophiala spinifera 91928 Fungi Fungi 90.1 2.59e-19   NR XP_016237266.1 91928 g34784 i0 79.6 0.98780487804878 54 11 98.8 0 2 163 395 448 XP_016237266.1 uncharacterized protein PV08_04241 [Exophiala spinifera] diamond 162 90.1 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Chaetothyriales Herpotrichiellaceae Exophiala Exophiala spinifera
29940931 29940931 PRJNA1065838_S_NODE_34691_length_164_cov_1.582609_g34589_i0 PRJNA1065838 34691 164 1.582609 2.59547876 Colletotrichum musicola 2175873 Fungi Fungi 41.6 0.0102   NR KAF6802596.1 2175873 g34589 i0 52.6 0.695121951219512 38 18 69.5 0 152 39 63 100 KAF6802596.1 hypothetical protein CMUS01_15313 [Colletotrichum musicola] diamond 114 41.6 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Glomerellales Glomerellaceae Colletotrichum Colletotrichum musicola
29940934 29940934 PRJNA1065838_S_NODE_36411_length_162_cov_0.902655_g36309_i0 PRJNA1065838 36411 162 0.902655 1.4623011 Sarocladium strictum 5046 Fungi Fungi 96.7 1.17e-21   NR KAL2202512.1 5046 g36309 i0 77.4 7.85185185185185 53 12 98.1 0 3 161 403 455 KAL2202512.1 adenosine deaminase [Sarocladium strictum] diamond 1272 96.7 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Sarocladiaceae Sarocladium Sarocladium strictum
31046871 31046871 PRJNA1065838_S_NODE_34375_length_165_cov_0.879310_g34273_i0 PRJNA1065838 34375 165 0.87931 1.4508615 Cladobotryum mycophilum 491253 Fungi Fungi 52.8 3.58e-6   NR KAK5994702.1 491253 g34273 i0 63 5.96363636363636 46 12 83.6 1 142 5 199 239 KAK5994702.1 hypothetical protein PT974_04689 [Cladobotryum mycophilum] diamond 984 52.8 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Hypocreaceae Cladobotryum Cladobotryum mycophilum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;