RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1065838", tax_kingdom = "Metazoa" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1065838 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27224972 27224972 PRJNA1065838_S_NODE_33443_length_166_cov_1.256410_g33341_i0 PRJNA1065838 33443 166 1.25641 2.0856406 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 84.7 2.03e-17   NR CAF0779293.1 104777 g33341 i0 76.6 1.80722891566265 47 11 84.9 0 24 164 692 738 CAF0779293.1 unnamed protein product [Brachionus calyciflorus] diamond 300 84.7 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
28930390 28930390 PRJNA1065838_S_NODE_17308_length_210_cov_4.136646_g17206_i0 PRJNA1065838 17308 210 4.136646 8.6869566 Rotaria sordida 392033 Rotifera other_Eukaryota 43.9 0.00913   NR CAF1236584.1 392033 g17206 i0 77.3 1.2 22 5 31.4 0 205 140 262 283 CAF1236584.1 unnamed protein product [Rotaria sordida] diamond 252 44.3 0.99097065462754 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sordida
31331006 31331006 PRJNA1065838_S_NODE_23316_length_193_cov_1.083333_g23214_i0 PRJNA1065838 23316 193 1.083333 2.09083269 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 103 5.89e-24   NR CAF1004757.1 104777 g23214 i0 75.4 1.89637305699482 61 15 94.8 0 6 188 188 248 CAF1004757.1 unnamed protein product [Brachionus calyciflorus] diamond 366 103 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;