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contig_metadata

6 rows where bioproject = "PRJNA1065838" and tax_clade = "PVC group"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • PVC group · 6 ✖

bioproject 1

  • PRJNA1065838 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2730632 2730632 PRJNA1065838_S_NODE_32843_length_167_cov_1.144068_g32741_i0 PRJNA1065838 32843 167 1.144068 1.91059356 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 52.8 0.014   NTclustered gi|2107924860|gb|CP070807.1| 2035772 g32741 i0 100 0.167664670658683 28 0 17 0 96 123 1703431 1703404 MAG: Candidatus Omnitrophota bacterium isolate bin1292 chromosome blastn 28 52.8 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
19305672 19305672 PRJNA1065838_S_NODE_21736_length_197_cov_1.054054_g21634_i0 PRJNA1065838 21736 197 1.054054 2.07648638 Thermoguttaceae bacterium 2691551 Bacteria Bacteria 99 2.16e-16   NTclustered gi|2814788363|emb|OY780964.2| 2691551 g21634 i0 90.541 1.15736040609137 74 7 38 0 124 197 889659 889586 MAG: Thermoguttaceae bacterium isolate 5d2646e0-01ad-46f9-a460-09296c79865c genome assembly, chromosome: 1 blastn 228 99 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Thermoguttaceae   Thermoguttaceae bacterium
28551616 28551616 PRJNA1065838_S_NODE_32327_length_168_cov_0.873950_g32225_i0 PRJNA1065838 32327 168 0.87395 1.468236 Tautonia plasticadhaerens 2527974 Bacteria Bacteria 61.2 3.1e-9   NR QDV35674.1 2527974 g32225 i0 52.5 1.05357142857143 59 23 98.2 2 166 2 84 141 QDV35674.1 Mrr restriction system protein [Tautonia plasticadhaerens] diamond 177 61.2 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Isosphaerales Isosphaeraceae Tautonia Tautonia plasticadhaerens
29940929 29940929 PRJNA1065838_S_NODE_25091_length_188_cov_0.625899_g24989_i0 PRJNA1065838 25091 188 0.625899 1.17669012 Lentisphaeria bacterium 2053569 Bacteria Bacteria 42.4 0.0249   NR MBR1966289.1 2053569 g24989 i0 33.3 1.0531914893617 66 36 95.7 2 7 186 64 127 MBR1966289.1 family 78 glycoside hydrolase catalytic domain [Lentisphaeria bacterium] diamond 198 42.4 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
31678877 31678877 PRJNA1065838_S_NODE_33997_length_165_cov_1.758621_g33895_i0 PRJNA1065838 33997 165 1.758621 2.90172465 Tepidisphaeraceae bacterium 2876886 Bacteria Bacteria 63.9 4.13e-10   NR HZN64606.1 2876886 g33895 i0 54.9 1.92727272727273 51 23 92.7 0 1 153 116 166 HZN64606.1 methyltransferase [Tepidisphaeraceae bacterium] diamond 318 63.9 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Tepidisphaerales Tepidisphaeraceae   Tepidisphaeraceae bacterium
32438573 32438573 PRJNA1065838_S_NODE_32319_length_168_cov_0.873950_g32217_i0 PRJNA1065838 32319 168 0.87395 1.468236 Chlamydiota bacterium 2081524 Bacteria Bacteria 81.6 2.65e-16   NR NGX45594.1 2081524 g32217 i0 68.5 0.964285714285714 54 17 96.4 0 1 162 455 508 NGX45594.1 ADP-ribosyl-[dinitrogen reductase] glycohydrolase [Chlamydiota bacterium] diamond 162 81.6 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;