RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1065838", tax_clade = "Opisthokonta" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA1065838 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10383455 10383455 PRJNA1065838_S_NODE_8989_length_257_cov_6.418269_g8887_i0 PRJNA1065838 8989 257 6.418269 16.49495133 Sinonovacula constricta 98310 Mollusca Mollusca 52.8 0.023   NTclustered gi|937961735|gb|KR534869.1| 98310 g8887 i0 100 0.108949416342412 28 0 11 0 213 240 28 1 Sinonovacula constricta insulin-like peptide 1 mRNA, complete cds blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Cardiida Solecurtidae Sinonovacula Sinonovacula constricta
28701197 28701197 PRJNA1065838_S_NODE_22787_length_194_cov_1.075862_g22685_i0 PRJNA1065838 22787 194 1.075862 2.08717228 Metazoa 33208 Mollusca Mollusca 67 2.77e-11   NR CAG2250983.1 6550 g22685 i0 47 7.0979381443299 66 33 99 1 194 3 5 70 CAG2250983.1 CTSB [Mytilus edulis] diamond 1377 67.4 0.99406528189911 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;