RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1063685" and tax_phylum = "Nanobdellota"

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tax_superkingdom 1

tax_phylum 1

  • Nanobdellota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1063685 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
179631 179631 PRJNA1063685_S_NODE_3821_length_775_cov_19.343305_g3414_i0 PRJNA1063685 3821 775 19.343305 149.91061375 Nanobdellati 1783276 Archaea Archaea 350 2.79e-116   NR MBU0667468.1 2026764 g3414 i0 71.8 22.2154838709677 238 67 92.1 0 10 723 195 432 MBU0667468.1 phosphopyruvate hydratase [Nanoarchaeota archaeon] diamond 17217 350 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
28867127 28867127 PRJNA1063685_S_NODE_5448_length_720_cov_7.126739_g4997_i0 PRJNA1063685 5448 720 7.126739 51.3125208 Nanobdellota archaeon 2026764 Archaea Archaea 46.2 0.0409   NR MEK6859137.1 2026764 g4997 i0 34.7 0.3125 75 44 29.2 2 681 472 14 88 MEK6859137.1 Era-like GTP-binding protein [Nanoarchaeota archaeon] diamond 225 46.2 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
32816706 32816706 PRJNA1063685_S_NODE_12400_length_594_cov_8.829175_g11883_i0 PRJNA1063685 12400 594 8.829175 52.4452995 Candidatus Nanoarchaeia archaeon 2910166 Archaea Archaea 223 2.8199999999999998e-67   NR MDP6845833.1 2910166 g11883 i0 69.3 1.64646464646465 163 50 82.3 0 6 494 307 469 MDP6845833.1 IMP dehydrogenase [Candidatus Nanoarchaeia archaeon] diamond 978 223 1 Archaea   Nanobdellati Nanobdellota Candidatus Nanoarchaeia       Candidatus Nanoarchaeia archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;