RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA1063685", tax_phylum = "Lenarviricota" and tax_superkingdom = "Viruses"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

  • Lenarviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1063685 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2730259 2730259 PRJNA1063685_S_NODE_57863_length_287_cov_9.644860_g57320_i0 PRJNA1063685 57863 287 9.64486 27.6807482 Sopapen virus 3131614 Viruses Viruses 119 2.58e-22   NTclustered gi|2717322942|gb|PP173915.1| 3131614 g57320 i0 83.333 150.428571428571 132 19 46 3 34 164 444 573 MAG: Sopapen virus isolate SP1A_k141_131186 genomic sequence blastn 43173 119 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes       Sopapen virus
28227168 28227168 PRJNA1063685_S_NODE_1606_length_969_cov_13.924107_g1314_i0 PRJNA1063685 1606 969 13.924107 134.92459683 Lenarviricota 2732407 Viruses Viruses 97.8 2.06e-18   NR UJQ92589.1 2809572 g1314 i0 34.6 1.1671826625387 188 105 53.3 9 3 518 507 692 UJQ92589.1 MAG: putative RNA-dependent RNA polymerase [Mitoviridae sp.] diamond 1131 97.8 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae   Mitoviridae sp.
29940917 29940917 PRJNA1063685_S_NODE_57611_length_288_cov_7.246512_g57068_i0 PRJNA1063685 57611 288 7.246512 20.86995456 Mitoviridae sp. 2809572 Viruses Viruses 82.4 7.13e-16   NR UJQ92566.1 2809572 g57068 i0 52.5 0.635416666666667 61 29 63.5 0 104 286 2 62 UJQ92566.1 MAG: putative RNA-dependent RNA polymerase [Mitoviridae sp.] diamond 183 82.4 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae   Mitoviridae sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;