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contig_metadata

31 rows where bioproject = "PRJNA1063685" and tax_phylum = "Chloroflexota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 31 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1063685 · 31 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8665398 8665398 PRJNA1063685_S_NODE_807_length_1193_cov_20.861607_g608_i0 PRJNA1063685 807 1193 20.861607 248.87897151 Phototrophicus 2922426 Bacteria Bacteria 1005 0   NTclustered gi|1932369605|gb|CP062983.1| 2710758 g608 i0 82.579 579.394803017603 1171 174 97 25 25 1182 2827430 2828583 Phototrophicus methaneseepsis strain ZRK33 chromosome, complete genome blastn 691218 1005 1 Bacteria   Bacillati Chloroflexota Candidatus Thermofontia Phototrophicales Phototrophicaceae Phototrophicus Phototrophicus methaneseepsis
9107406 9107406 PRJNA1063685_S_NODE_64228_length_266_cov_2.906736_g63685_i0 PRJNA1063685 64228 266 2.906736 7.73191776 uncultured Chloroflexota bacterium 166587 Bacteria Bacteria 82.4 3.1e-11   NTclustered gi|577860303|dbj|AB826881.1| 166587 g63685 i0 91.803 24.9248120300752 61 2 23 3 204 263 217 159 Uncultured Chloroflexi bacterium gene for 16S rRNA, partial sequence, clone: OGT_AB15_32.5cm_86 blastn 6630 82.4 1 Bacteria   Bacillati Chloroflexota         uncultured Chloroflexota bacterium
17589800 17589800 PRJNA1063685_S_NODE_43994_length_347_cov_5.383212_g43451_i0 PRJNA1063685 43994 347 5.383212 18.67974564 Chloroflexus 1107 Bacteria Bacteria 274 6.439999999999998e-69   NTclustered gi|470483916|ref|NR_076619.1| 152260 g43451 i0 82.748 229.64265129683 313 49 90 5 15 325 975 666 Chloroflexus aggregans strain MD-66 23S ribosomal RNA gene, complete sequence blastn 79686 274 1 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales Chloroflexaceae Chloroflexus Chloroflexus aggregans
27027155 27027155 PRJNA1063685_S_NODE_22822_length_484_cov_2.355231_g22282_i0 PRJNA1063685 22822 484 2.355231 11.39931804 Bacteria 2 Bacteria Bacteria 91.7 6.58e-19   NR MCB0132952.1 2614250 g22282 i0 42.6 2.39876033057851 122 62 74.4 3 1 360 145 260 MCB0132952.1 DUF1298 domain-containing protein [Caldilineaceae bacterium] diamond 1161 91.7 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium
27446579 27446579 PRJNA1063685_S_NODE_24783_length_467_cov_42.710660_g24243_i0 PRJNA1063685 24783 467 42.71066 199.4587822 Anaerolineae bacterium 2052143 Bacteria Bacteria 144 5.6e-38   NR HIP72898.1 2052143 g24243 i0 51.5 1.69593147751606 132 64 84.8 0 449 54 274 405 HIP72898.1 PLP-dependent aminotransferase family protein [Anaerolineae bacterium] diamond 792 144 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
27856705 27856705 PRJNA1063685_S_NODE_30785_length_423_cov_3.388571_g30243_i0 PRJNA1063685 30785 423 3.3885710000000002 14.33365533 Anaerolineales bacterium 2073117 Bacteria Bacteria 132 1.02e-34   NR MFN2145845.1 2073117 g30243 i0 59 1.5177304964539 105 41 74.5 1 15 329 211 313 MFN2145845.1 PLP-dependent cysteine synthase family protein [Anaerolineales bacterium] diamond 642 132 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
28046185 28046185 PRJNA1063685_S_NODE_22565_length_486_cov_2.573850_g22025_i0 PRJNA1063685 22565 486 2.57385 12.508911 Anaerolineae bacterium 2052143 Bacteria Bacteria 64.7 1.19e-8   NR MCB0191143.1 2052143 g22025 i0 52.5 0.364197530864198 59 25 34.6 1 486 319 126 184 MCB0191143.1 glycosyltransferase [Anaerolineae bacterium] diamond 177 64.7 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
28046188 28046188 PRJNA1063685_S_NODE_27545_length_447_cov_2.815508_g27004_i0 PRJNA1063685 27545 447 2.815508 12.58532076 Anaerolineae bacterium 2052143 Bacteria Bacteria 120 2.33e-28   NR MBZ0320240.1 2052143 g27004 i0 45 1 149 77 98.7 2 6 446 276 421 MBZ0320240.1 hypothetical protein [Anaerolineae bacterium] diamond 447 120 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
28551599 28551599 PRJNA1063685_S_NODE_53467_length_304_cov_2.441558_g52924_i0 PRJNA1063685 53467 304 2.441558 7.42233632 Chloroflexota bacterium 2026724 Bacteria Bacteria 114 9.35e-29   NR MDQ4043831.1 2026724 g52924 i0 93.4 1.19407894736842 61 4 60.2 0 199 17 1 61 MDQ4043831.1 50S ribosomal protein L2 [Chloroflexota bacterium] diamond 363 114 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
28646245 28646245 PRJNA1063685_S_NODE_27987_length_444_cov_1.522911_g27446_i0 PRJNA1063685 27987 444 1.522911 6.76172484 Tengunoibacter tsumagoiensis 2014871 Bacteria Bacteria 66.2 2.08e-9   NR WP_126582944.1 2014871 g27446 i0 33.5 1.0472972972973 155 84 98.6 4 443 6 246 390 WP_126582944.1 right-handed parallel beta-helix repeat-containing protein [Tengunoibacter tsumagoiensis] diamond 465 66.2 1 Bacteria   Bacillati Chloroflexota Ktedonobacteria Ktedonobacterales Dictyobacteraceae Tengunoibacter Tengunoibacter tsumagoiensis
28677850 28677850 PRJNA1063685_S_NODE_3387_length_795_cov_1.675900_g2991_i0 PRJNA1063685 3387 795 1.6759 13.323405 Candidatus Limnocylindrales bacterium 2952938 Bacteria Bacteria 103 6.3e-21   NR HXC52407.1 2952938 g2991 i0 40 0.528301886792453 140 80 52.8 2 795 376 331 466 HXC52407.1 ice-binding family protein [Candidatus Limnocylindrales bacterium] diamond 420 103 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria Candidatus Limnocylindrales     Candidatus Limnocylindrales bacterium
28835551 28835551 PRJNA1063685_S_NODE_15008_length_562_cov_4.742331_g14480_i0 PRJNA1063685 15008 562 4.742331 26.65190022 Anaerolineae bacterium 2052143 Bacteria Bacteria 137 4.939999999999998e-35   NR HUT15530.1 2052143 g14480 i0 44.1 3.91281138790036 186 88 93.4 3 549 25 221 401 HUT15530.1 serpin family protein [Anaerolineae bacterium] diamond 2199 137 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
29143347 29143347 PRJNA1063685_S_NODE_12669_length_591_cov_3.565637_g12151_i0 PRJNA1063685 12669 591 3.565637 21.07291467 Bacteria 2 Bacteria Bacteria 155 4.1e-42   NR MDQ2809185.1 2026724 g12151 i0 48.1 3.15228426395939 160 82 80.7 1 586 110 191 350 MDQ2809185.1 HoxN/HupN/NixA family nickel/cobalt transporter [Chloroflexota bacterium] diamond 1863 155 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
29300984 29300984 PRJNA1063685_S_NODE_12529_length_592_cov_17.327553_g12012_i0 PRJNA1063685 12529 592 17.327553 102.57911376 Bacteria 2 Bacteria Bacteria 106 2.33e-25   NR OGO51147.1 1797660 g12012 i0 48.2 1.85472972972973 110 57 55.7 0 426 97 31 140 OGO51147.1 MAG: hypothetical protein A2148_07120 [Chloroflexi bacterium RBG_16_68_14] diamond 1098 106 1 Bacteria   Bacillati Chloroflexota         Chloroflexi bacterium RBG_16_68_14
29403936 29403936 PRJNA1063685_S_NODE_16909_length_540_cov_31.490364_g16377_i0 PRJNA1063685 16909 540 31.490364 170.0479656 Chloroflexota bacterium 2026724 Bacteria Bacteria 121 4.57e-31   NR PZC49292.1 2026724 g16377 i0 50 0.8 144 64 77.2 4 436 20 15 155 PZC49292.1 MAG: putative RNA-binding protein, associated with RNAse of E/G family [Chloroflexota bacterium] diamond 432 121 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
29403953 29403953 PRJNA1063685_S_NODE_37469_length_382_cov_2.359223_g36926_i0 PRJNA1063685 37469 382 2.359223 9.01223186 Dehalococcoidales bacterium 2026733 Bacteria Bacteria 122 1.13e-29   NR UCD08047.1 2026733 g36926 i0 55.7 4.86125654450262 122 51 95 2 365 3 417 536 UCD08047.1 MAG: amidase, partial [Dehalococcoidales bacterium] diamond 1857 122 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia Dehalococcoidales     Dehalococcoidales bacterium
29498566 29498566 PRJNA1063685_S_NODE_10910_length_615_cov_6.916974_g10395_i0 PRJNA1063685 10910 615 6.916974 42.5393901 Anaerolineae bacterium 2052143 Bacteria Bacteria 65.9 4.87e-10   NR MCL4256510.1 2052143 g10395 i0 35 0.502439024390244 103 64 50.2 2 415 107 18 117 MCL4256510.1 plasmid pRiA4b ORF-3 family protein [Anaerolineae bacterium] diamond 309 65.9 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
29592946 29592946 PRJNA1063685_S_NODE_14750_length_565_cov_5.152439_g14223_i0 PRJNA1063685 14750 565 5.152439 29.11128035 Anaerolineales bacterium 2073117 Bacteria Bacteria 87.4 1.82e-16   NR MCS6992376.1 2073117 g14223 i0 35.5 1.70442477876106 172 105 88.7 2 2 502 218 388 MCS6992376.1 MFS transporter [Anaerolineales bacterium] diamond 963 87.4 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
29750984 29750984 PRJNA1063685_S_NODE_27571_length_446_cov_36.308311_g27030_i0 PRJNA1063685 27571 446 36.308311 161.93506706 Chloroflexota bacterium 2026724 Bacteria Bacteria 44.7 0.0482   NR MBI3912848.1 2026724 g27030 i0 33 0.652466367713004 97 59 64.6 3 387 100 166 257 MBI3912848.1 EF2563 family selenium-dependent molybdenum hydroxylase system protein [Chloroflexota bacterium] diamond 291 44.7 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
29837605 29837605 PRJNA1063685_S_NODE_3591_length_785_cov_30.987360_g3190_i0 PRJNA1063685 3591 785 30.98736 243.250776 Chloroflexota 200795 Bacteria Bacteria 119 4.770000000000001e-27   NR NDJ75207.1 2026724 g3190 i0 37.3 11.396178343949 244 137 92.1 8 760 38 204 434 NDJ75207.1 glycoside hydrolase family 32 protein [Chloroflexota bacterium] diamond 8946 119 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
29940896 29940896 PRJNA1063685_S_NODE_20111_length_508_cov_24.347126_g19573_i0 PRJNA1063685 20111 508 24.347126 123.68340008 Chloroflexota bacterium 2026724 Bacteria Bacteria 77.4 4.32e-13   NR MCX6021519.1 2026724 g19573 i0 41.2 1.22244094488189 97 57 57.3 0 410 120 357 453 MCX6021519.1 MmgE/PrpD family protein [Chloroflexota bacterium] diamond 621 77.4 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
30027375 30027375 PRJNA1063685_S_NODE_28931_length_436_cov_13.250689_g28389_i0 PRJNA1063685 28931 436 13.250689 57.773004039999996 Chloroflexota 200795 Bacteria Bacteria 114 8.5e-27   NR OGO10753.1 1797638 g28389 i0 46.1 6.70871559633028 128 69 88.1 0 2 385 338 465 OGO10753.1 MAG: hypothetical protein A2Y93_17740 [Chloroflexi bacterium RBG_13_68_17] diamond 2925 114 1 Bacteria   Bacillati Chloroflexota         Chloroflexi bacterium RBG_13_68_17
30406751 30406751 PRJNA1063685_S_NODE_47733_length_329_cov_3.976562_g47190_i0 PRJNA1063685 47733 329 3.976562 13.08288898 Bacillati 1783272 Bacteria Bacteria 62.4 1.21e-8   NR BAL54660.1 166587 g47190 i0 60 2.82674772036474 45 18 41 0 1 135 388 432 BAL54660.1 sulfonate/nitrate/taurine transport system ATP-binding protein [uncultured Chloroflexota bacterium] diamond 930 62.4 1 Bacteria   Bacillati Chloroflexota         uncultured Chloroflexota bacterium
30698927 30698927 PRJNA1063685_S_NODE_34934_length_397_cov_1.891975_g34392_i0 PRJNA1063685 34934 397 1.891975 7.51114075 Ardenticatenaceae bacterium 2614247 Bacteria Bacteria 197 1.82e-62   NR MCB9430965.1 2614247 g34392 i0 85.6 0.838790931989924 111 16 83.9 0 64 396 1 111 MCB9430965.1 profilin [Ardenticatenaceae bacterium] diamond 333 197 1 Bacteria   Bacillati Chloroflexota Ardenticatenia Ardenticatenales Ardenticatenaceae   Ardenticatenaceae bacterium
31078334 31078334 PRJNA1063685_S_NODE_54175_length_301_cov_3.543860_g53632_i0 PRJNA1063685 54175 301 3.54386 10.6670186 Anaerolineaceae bacterium 2024896 Bacteria Bacteria 58.9 9.42e-8   NR HEY3345694.1 2024896 g53632 i0 37.1 2.90033222591362 97 57 96.7 2 9 299 67 159 HEY3345694.1 DUF4397 domain-containing protein [Anaerolineaceae bacterium] diamond 873 58.9 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium
31195901 31195901 PRJNA1063685_S_NODE_62055_length_273_cov_2.310000_g61512_i0 PRJNA1063685 62055 273 2.31 6.3063 Bacteria 2 Bacteria Bacteria 108 2.79e-25   NR MBN1120542.1 2052143 g61512 i0 57.8 3.98901098901099 90 37 97.8 1 271 5 716 805 MBN1120542.1 hypothetical protein [Anaerolineae bacterium] diamond 1089 108 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
31354496 31354496 PRJNA1063685_S_NODE_17656_length_533_cov_3.830435_g17120_i0 PRJNA1063685 17656 533 3.830435 20.41621855 Bacteria 2 Bacteria Bacteria 209 9.7e-60   NR RPI87573.1 2026724 g17120 i0 63.8 15.3489681050657 160 57 90.1 1 36 515 9 167 RPI87573.1 MAG: aldehyde dehydrogenase family protein [Chloroflexota bacterium] diamond 8181 210 0.995238095238095 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31931924 31931924 PRJNA1063685_S_NODE_14997_length_562_cov_5.862986_g14469_i0 PRJNA1063685 14997 562 5.862986 32.94998132 Chloroflexota bacterium 2026724 Bacteria Bacteria 113 2.79e-26   NR NOZ29643.1 2026724 g14469 i0 40.6 0.854092526690391 160 68 85.4 3 3 482 228 360 NOZ29643.1 methyltransferase domain-containing protein [Chloroflexota bacterium] diamond 480 113 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
32248788 32248788 PRJNA1063685_S_NODE_31438_length_418_cov_10.220290_g30896_i0 PRJNA1063685 31438 418 10.22029 42.7208122 Anaerolineae bacterium 2052143 Bacteria Bacteria 64.7 5.45e-10   NR MFN2108833.1 2052143 g30896 i0 30.8 0.933014354066986 130 77 91.1 3 391 11 30 149 MFN2108833.1 transposase family protein [Anaerolineae bacterium] diamond 390 64.7 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
32280309 32280309 PRJNA1063685_S_NODE_26759_length_453_cov_1.413158_g26218_i0 PRJNA1063685 26759 453 1.413158 6.40160574 Anaerolineae bacterium 2052143 Bacteria Bacteria 170 2.6399999999999994e-48   NR MBN1811782.1 2052143 g26218 i0 52 1.97350993377483 148 71 98 0 445 2 252 399 MBN1811782.1 pyridoxal phosphate-dependent aminotransferase [Anaerolineae bacterium] diamond 894 170 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
32619567 32619567 PRJNA1063685_S_NODE_77520_length_229_cov_3.070513_g76977_i0 PRJNA1063685 77520 229 3.070513 7.03147477 Chloroflexota 200795 Bacteria Bacteria 78.6 3.62e-16   NR MDZ4158873.1 2024896 g76977 i0 53.6 16.6506550218341 69 32 90.4 0 229 23 36 104 MDZ4158873.1 pyrroline-5-carboxylate reductase dimerization domain-containing protein [Anaerolineaceae bacterium] diamond 3813 79 0.994936708860759 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;