RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1063685" and tax_phylum = "Candidatus Marsarchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Marsarchaeota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1063685 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31227737 31227737 PRJNA1063685_S_NODE_70655_length_249_cov_0.875000_g70112_i0 PRJNA1063685 70655 249 0.875 2.17875 root 1 Root_unresolved Root_unresolved 94 1.7400000000000003e-21   NR PSN91064.1 1978157 g70112 i0 55.3 3.73493975903614 76 34 91.6 0 6 233 69 144 PSN91064.1 MAG: IMP dehydrogenase, partial [Candidatus Marsarchaeota G2 archaeon OSP_D] diamond 930 94.4 0.995762711864407 Archaea Candidatus Marsarchaeota group 2 Thermoproteati Candidatus Marsarchaeota         Candidatus Marsarchaeota G2 archaeon OSP_D

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;