RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1063685" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1063685 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28267044 28267044 PRJNA1063685_S_NODE_46566_length_335_cov_2.000000_g46023_i0 PRJNA1063685 46566 335 2 6.7 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 137 1.85e-37   NR MBI4557608.1 2030809 g46023 i0 70.8 1.83582089552239 96 28 86 0 13 300 128 223 MBI4557608.1 PEP-CTERM sorting domain-containing protein [Candidatus Hydrogenedentota bacterium] diamond 615 137 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
31489466 31489466 PRJNA1063685_S_NODE_6816_length_687_cov_4.695440_g6331_i0 PRJNA1063685 6816 687 4.69544 32.2576728 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 201 1.7899999999999998e-56   NR GMV92848.1 2030809 g6331 i0 56.1 4.95633187772926 164 72 71.6 0 687 196 217 380 GMV92848.1 MAG: hypothetical protein AMXMBFR82_26260 [Candidatus Hydrogenedentota bacterium] diamond 3405 203 0.990147783251232 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;