contig_metadata
18 rows where bioproject = "PRJNA1063685" and tax_kingdom = "Thermotogati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 179596 | 179596 | PRJNA1063685_S_NODE_34101_length_402_cov_1.863222_g33559_i0 | PRJNA1063685 | 34101 | 402 | 1.863222 | 7.49015244 | Deinococcus taeanensis | 2737050 | Bacteria | Bacteria | 586 | 8.539999999999997e-163 | NTclustered | gi|2105694697|gb|CP083456.1| | 2737050 | g33559 | i0 | 93.052 | 194.228855721393 | 403 | 24 | 100 | 3 | 1 | 402 | 1470 | 1869 | Deinococcus taeanensis strain TS293 plasmid p_TS293_2, complete sequence | blastn | 78080 | 586 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus taeanensis | ||
| 4006182 | 4006182 | PRJNA1063685_S_NODE_55544_length_296_cov_2.417040_g55001_i0 | PRJNA1063685 | 55544 | 296 | 2.41704 | 7.1544384 | Deinococcus ficus | 317577 | Bacteria | Bacteria | 335 | 2.44e-87 | NTclustered | gi|1220362168|gb|CP021081.1| | 317577 | g55001 | i0 | 88.38 | 163.885135135135 | 284 | 26 | 95 | 7 | 1 | 280 | 2343016 | 2342736 | Deinococcus ficus strain CC-FR2-10, complete genome | blastn | 48510 | 335 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus ficus | ||
| 5282355 | 5282355 | PRJNA1063685_S_NODE_36525_length_387_cov_4.614650_g35982_i0 | PRJNA1063685 | 36525 | 387 | 4.61465 | 17.8586955 | Fretibacterium fastidiosum | 651822 | Bacteria | Bacteria | 342 | 1.96e-89 | NTclustered | gi|2869663113|emb|OZ209244.1| | 651822 | g35982 | i0 | 84.615 | 90.1653746770026 | 364 | 34 | 95 | 15 | 1 | 358 | 68268 | 68615 | Fretibacterium fastidiosum strain SGP1 genome assembly, chromosome: Ff3 | blastn | 34894 | 342 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Aminobacteriaceae | Fretibacterium | Fretibacterium fastidiosum | ||
| 5282496 | 5282496 | PRJNA1063685_S_NODE_51385_length_313_cov_2.312500_g50842_i0 | PRJNA1063685 | 51385 | 313 | 2.3125 | 7.238125 | Fretibacterium fastidiosum | 651822 | Bacteria | Bacteria | 361 | 4.28e-95 | NTclustered | gi|2869663113|emb|OZ209244.1| | 651822 | g50842 | i0 | 88.449 | 1.93610223642173 | 303 | 30 | 96 | 3 | 12 | 313 | 2726524 | 2726226 | Fretibacterium fastidiosum strain SGP1 genome assembly, chromosome: Ff3 | blastn | 606 | 361 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Aminobacteriaceae | Fretibacterium | Fretibacterium fastidiosum | ||
| 6557305 | 6557305 | PRJNA1063685_S_NODE_16986_length_540_cov_3.019272_g16454_i0 | PRJNA1063685 | 16986 | 540 | 3.019272 | 16.3040688 | Trueperaceae bacterium | 2026798 | Bacteria | Bacteria | 669 | 0 | NTclustered | gi|2108366028|gb|CP070651.1| | 2026798 | g16454 | i0 | 89.031 | 429.888888888889 | 547 | 51 | 99 | 5 | 1 | 538 | 8121 | 7575 | MAG: Trueperaceae bacterium isolate bin86 chromosome | blastn | 232140 | 669 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Trueperaceae bacterium | |||
| 10382680 | 10382680 | PRJNA1063685_S_NODE_17789_length_531_cov_38.733624_g17253_i0 | PRJNA1063685 | 17789 | 531 | 38.733624 | 205.67554344 | Deinococcus gobiensis | 502394 | Bacteria | Bacteria | 928 | 0 | NTclustered | gi|379998737|gb|CP002191.1| | 745776 | g17253 | i0 | 99.606 | 193.551789077213 | 508 | 2 | 96 | 0 | 24 | 531 | 109591 | 110098 | Deinococcus gobiensis I-0, complete genome | blastn | 102776 | 928 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus gobiensis | ||
| 10382962 | 10382962 | PRJNA1063685_S_NODE_4769_length_740_cov_7.019490_g4343_i0 | PRJNA1063685 | 4769 | 740 | 7.01949 | 51.944226 | Deinococcus sp. NW-56 | 2080419 | Bacteria | Bacteria | 684 | 0 | NTclustered | gi|1339790003|gb|CP026516.1| | 2080419 | g4343 | i0 | 95.592 | 170.885135135135 | 431 | 11 | 100 | 7 | 1 | 428 | 543538 | 543113 | Deinococcus sp. NW-56 chromosome, complete genome | blastn | 126455 | 684 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. NW-56 | ||
| 11215611 | 11215611 | PRJNA1063685_S_NODE_829_length_1181_cov_22.564079_g8_i16 | PRJNA1063685 | 829 | 1181 | 22.564079 | 266.48177299 | Deinococcus | 1298 | Bacteria | Bacteria | 1537 | 0 | NTclustered | gi|470478007|ref|NR_076423.1| | 68909 | g8 | i16 | 90.722 | 411.920406435224 | 1164 | 93 | 98 | 14 | 24 | 1181 | 1 | 1155 | Deinococcus geothermalis plasmid pDGEO01 strain AG-3a 23S ribosomal RNA gene, complete sequence | blastn | 486478 | 1548 | 0.992894056847545 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus geothermalis | ||
| 11658028 | 11658028 | PRJNA1063685_S_NODE_25030_length_466_cov_2.743003_g24490_i0 | PRJNA1063685 | 25030 | 466 | 2.743003 | 12.78239398 | uncultured Deinococcus sp. | 158789 | Bacteria | Bacteria | 789 | 0 | NTclustered | gi|164453680|gb|EU341287.1| | 158789 | g24490 | i0 | 100 | 89.5343347639485 | 427 | 0 | 92 | 0 | 20 | 446 | 427 | 1 | Uncultured Deinococcus sp. clone AV_8R-S-F11 16S ribosomal RNA gene, partial sequence | blastn | 41723 | 789 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | uncultured Deinococcus sp. | ||
| 18031390 | 18031390 | PRJNA1063685_S_NODE_50395_length_317_cov_5.348361_g49852_i0 | PRJNA1063685 | 50395 | 317 | 5.348361 | 16.95430437 | Trueperaceae bacterium | 2026798 | Bacteria | Bacteria | 396 | 1.1899999999999997e-105 | NTclustered | gi|2621701816|emb|OY759346.1| | 2026798 | g49852 | i0 | 92.701 | 424.195583596215 | 274 | 20 | 86 | 0 | 21 | 294 | 3599936 | 3599663 | MAG: Trueperaceae bacterium isolate dd143a13-9bf8-4812-ba0e-a3cf349d91ff genome assembly, chromosome: 1 | blastn | 134470 | 396 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Trueperaceae bacterium | |||
| 18031438 | 18031438 | PRJNA1063685_S_NODE_55895_length_295_cov_1.157658_g55352_i0 | PRJNA1063685 | 55895 | 295 | 1.157658 | 3.4150911 | Deinococcus sp. NW-56 | 2080419 | Bacteria | Bacteria | 303 | 6.85e-78 | NTclustered | gi|1339790003|gb|CP026516.1| | 2080419 | g55352 | i0 | 85.714 | 140.328813559322 | 294 | 35 | 99 | 6 | 1 | 293 | 543526 | 543239 | Deinococcus sp. NW-56 chromosome, complete genome | blastn | 41397 | 303 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. NW-56 | ||
| 23131987 | 23131987 | PRJNA1063685_S_NODE_5139_length_729_cov_5.092988_g4700_i0 | PRJNA1063685 | 5139 | 729 | 5.092988 | 37.12788252 | Deinococcus aquaticus | 328692 | Bacteria | Bacteria | 704 | 0 | NTclustered | gi|2444120906|gb|CP115165.1| | 328692 | g4700 | i0 | 97.129 | 225.949245541838 | 418 | 10 | 100 | 2 | 313 | 729 | 716417 | 716001 | Deinococcus aquaticus strain PB-314 chromosome, complete genome | blastn | 164717 | 704 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus aquaticus | ||
| 23964610 | 23964610 | PRJNA1063685_S_NODE_75539_length_236_cov_8.828221_g74996_i0 | PRJNA1063685 | 75539 | 236 | 8.828221 | 20.83460156 | Deinococcus | 1298 | Bacteria | Bacteria | 394 | 3.05e-105 | NTclustered | gi|1435316362|gb|CP031158.1| | 980427 | g74996 | i0 | 100 | 156.792372881356 | 213 | 0 | 90 | 0 | 24 | 236 | 1792231 | 1792019 | Deinococcus wulumuqiensis strain NEB 479 chromosome, complete genome | blastn | 37003 | 394 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus wulumuqiensis | ||
| 24405438 | 24405438 | PRJNA1063685_S_NODE_2520_length_851_cov_20.982005_g2157_i0 | PRJNA1063685 | 2520 | 851 | 20.982005 | 178.55686255 | Deinococcus peraridilitoris | 432329 | Bacteria | Bacteria | 377 | 9.91e-127 | NR | WP_085931722.1 | 432329 | g2157 | i0 | 71.6 | 0.90599294947121 | 257 | 73 | 90.6 | 0 | 830 | 60 | 148 | 404 | WP_085931722.1 acyl-CoA dehydrogenase family protein [Deinococcus peraridilitoris] | diamond | 771 | 377 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus peraridilitoris | ||
| 24405661 | 24405661 | PRJNA1063685_S_NODE_48980_length_323_cov_9.756000_g48437_i0 | PRJNA1063685 | 48980 | 323 | 9.756 | 31.51188 | Deinococcus gobiensis | 502394 | Bacteria | Bacteria | 490 | 5.42e-134 | NTclustered | gi|379998737|gb|CP002191.1| | 745776 | g48437 | i0 | 96.309 | 191.05572755418 | 298 | 11 | 92 | 0 | 1 | 298 | 111893 | 111596 | Deinococcus gobiensis I-0, complete genome | blastn | 61711 | 490 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus gobiensis | ||
| 24405668 | 24405668 | PRJNA1063685_S_NODE_49540_length_321_cov_2.931452_g48997_i0 | PRJNA1063685 | 49540 | 321 | 2.931452 | 9.40996092 | Deinococcus aquaticus | 328692 | Bacteria | Bacteria | 571 | 1.8699999999999993e-158 | NTclustered | gi|2444120906|gb|CP115165.1| | 328692 | g48997 | i0 | 98.754 | 204.06230529595 | 321 | 4 | 100 | 0 | 1 | 321 | 715059 | 714739 | Deinococcus aquaticus strain PB-314 chromosome, complete genome | blastn | 65504 | 571 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus aquaticus | ||
| 27320061 | 27320061 | PRJNA1063685_S_NODE_19803_length_511_cov_12.796804_g19265_i0 | PRJNA1063685 | 19803 | 511 | 12.796804 | 65.39166844 | Deinococcus sp. | 47478 | Bacteria | Bacteria | 161 | 3.94e-46 | NR | MDO4263478.1 | 47478 | g19265 | i0 | 58 | 3.70450097847358 | 157 | 57 | 92.2 | 3 | 488 | 18 | 96 | 243 | MDO4263478.1 DUF4388 domain-containing protein [Deinococcus sp.] | diamond | 1893 | 161 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. | ||
| 32406725 | 32406725 | PRJNA1063685_S_NODE_16899_length_541_cov_2.014957_g16367_i0 | PRJNA1063685 | 16899 | 541 | 2.014957 | 10.90091737 | Thermovirga lienii | 336261 | Bacteria | Bacteria | 131 | 6.4e-35 | NR | WP_334139740.1 | 336261 | g16367 | i0 | 51.2 | 1.40850277264325 | 127 | 60 | 70.4 | 1 | 435 | 55 | 6 | 130 | WP_334139740.1 ribonuclease HI family protein [Thermovirga lienii] | diamond | 762 | 131 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Thermovirgaceae | Thermovirga | Thermovirga lienii |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;