RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1063685", tax_kingdom = "Thermoproteati" and tax_phylum = "Thermoproteota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Thermoproteota · 2 ✖

tax_kingdom 1

  • Thermoproteati · 2 ✖

bioproject 1

  • PRJNA1063685 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18863304 18863304 PRJNA1063685_S_NODE_12675_length_591_cov_3.249035_g12157_i0 PRJNA1063685 12675 591 3.249035 19.20179685 root 1 Root_unresolved Root_unresolved 63.9 2.7e-5   NTclustered gi|969874815|gb|CP013695.1| 2285 g12157 i0 100 19.3502538071066 34 0 6 0 558 591 41 8 Sulfolobus acidocaldarius strain NG05B_CO5_07 chromosome blastn 11436 63.9 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Sulfolobus Sulfolobus acidocaldarius
27951579 27951579 PRJNA1063685_S_NODE_15565_length_555_cov_10.381743_g15037_i0 PRJNA1063685 15565 555 10.381743 57.61867365 Thermoproteota archaeon 2056631 Archaea Archaea 54.3 3.34e-5   NR MCD6490725.1 2056631 g15037 i0 30.4 1.91351351351351 102 70 55.1 1 183 488 120 220 MCD6490725.1 DUF3782 domain-containing protein [Thermoproteota archaeon] diamond 1062 54.3 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;