RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1063685", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1063685 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1454432 1454432 PRJNA1063685_S_NODE_6082_length_703_cov_29.469841_g5609_i0 PRJNA1063685 6082 703 29.469841 207.17298223 Rozella allomycis CSF55 988480 Fungi Fungi 281 5.22e-93   NR EPZ33870.1 988480 g5609 i0 70.4 0.849217638691323 199 57 84.1 1 653 63 3 201 EPZ33870.1 60S ribosomal protein L13a [Rozella allomycis CSF55] diamond 597 281 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
5282666 5282666 PRJNA1063685_S_NODE_7385_length_674_cov_46.497504_g6895_i0 PRJNA1063685 7385 674 46.497504 313.39317696 Rozella allomycis CSF55 988480 Fungi Fungi 279 2.13e-92   NR EPZ33870.1 988480 g6895 i0 69.8 2.44807121661721 199 58 87.7 1 620 30 3 201 EPZ33870.1 60S ribosomal protein L13a [Rozella allomycis CSF55] diamond 1650 279 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
26877554 26877554 PRJNA1063685_S_NODE_6561_length_693_cov_3.970968_g6080_i0 PRJNA1063685 6561 693 3.970968 27.51880824 Rozella allomycis CSF55 988480 Fungi Fungi 139 6.9e-35   NR RKP16727.1 988480 g6080 i0 40.2 1.57142857142857 199 112 83.5 5 23 601 258 455 RKP16727.1 hypothetical protein ROZALSC1DRAFT_31404 [Rozella allomycis CSF55] diamond 1089 139 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;