RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1063685", tax_kingdom = "Bacillati" and tax_phylum = "Vulcanimicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA1063685 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15482113 15482113 PRJNA1063685_S_NODE_11253_length_610_cov_18.534451_g10738_i0 PRJNA1063685 11253 610 18.534451 113.0601511 Candidatus Cybelea sp. 2952917 Bacteria Bacteria 212 1.85e-61   NR HYM33218.1 2952917 g10738 i0 56.9 0.89016393442623 181 77 89 1 64 606 24 203 HYM33218.1 ABC transporter ATP-binding protein/permease [Candidatus Cybelea sp.] diamond 543 212 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Candidatus Cybelea Candidatus Cybelea sp.
19305077 19305077 PRJNA1063685_S_NODE_16276_length_547_cov_15.339662_g15746_i0 PRJNA1063685 16276 547 15.339662 83.90795114 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 497 5.75e-136   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g15746 i0 84.221 82.8391224862888 526 68 95 14 24 541 5031240 5031758 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 45313 497 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;