RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1063685", tax_clade = "Metamonada" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 4 ✖

tax_clade 1

  • Metamonada · 4 ✖

bioproject 1

  • PRJNA1063685 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30161678 30161678 PRJNA1063685_S_NODE_6592_length_692_cov_7.405493_g6110_i0 PRJNA1063685 6592 692 7.405493 51.24601156 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 47.4 0.0395   NR KAG9393434.1 201153 g6110 i0 38.7 0.32514450867052 75 41 31.6 2 293 75 2556 2627 KAG9393434.1 WH2 domain [Carpediemonas membranifera] diamond 225 47.4 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
30193385 30193385 PRJNA1063685_S_NODE_18352_length_526_cov_4.187638_g17816_i0 PRJNA1063685 18352 526 4.187638 22.02697588 Aduncisulcus paluster 2918883 Fornicata other_Eukaryota 107 1.76e-25   NR GKT28404.1 2918883 g17816 i0 36.4 3.0171102661597 176 105 99.2 5 525 4 25 195 GKT28404.1 Glycoside hydrolase, family 25 like protein [Aduncisulcus paluster] diamond 1587 107 1 Eukaryota Metamonada   Fornicata       Aduncisulcus Aduncisulcus paluster
30257036 30257036 PRJNA1063685_S_NODE_17452_length_535_cov_3.932900_g16917_i0 PRJNA1063685 17452 535 3.9329 21.041015 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 80.5 5.51e-14   NR KAG9394743.1 201153 g16917 i0 37.4 0.644859813084112 115 72 64.5 0 534 190 176 290 KAG9394743.1 MAC/Perforin domain [Carpediemonas membranifera] diamond 345 80.5 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
32785146 32785146 PRJNA1063685_S_NODE_60640_length_278_cov_1.126829_g60097_i0 PRJNA1063685 60640 278 1.126829 3.13258462 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 68.2 4.29e-11   NR KAG9394509.1 201153 g60097 i0 39.8 1.00359712230216 93 33 90.6 2 16 267 214 292 KAG9394509.1 cyclin-dependent kinase like [Carpediemonas membranifera] diamond 279 68.2 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;