RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1063685", tax_clade = "FCB group" and tax_phylum = "Candidatus Kapaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA1063685 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27919859 27919859 PRJNA1063685_S_NODE_10005_length_629_cov_2.553957_g9492_i0 PRJNA1063685 10005 629 2.553957 16.06438953 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 202 8.599999999999998e-61   NR HWF43590.1 2447898 g9492 i0 47.2 3.11923688394277 218 106 99.7 3 2 628 45 262 HWF43590.1 PIG-L family deacetylase [Candidatus Kapaibacterium sp.] diamond 1962 202 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
30098555 30098555 PRJNA1063685_S_NODE_15712_length_553_cov_24.829167_g15184_i0 PRJNA1063685 15712 553 24.829167 137.30529351 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 133 3.29e-32   NR MFN8362070.1 2447898 g15184 i0 42.6 1.71428571428571 169 97 91.7 0 531 25 729 897 MFN8362070.1 PAS domain S-box protein [Candidatus Kapaibacterium sp.] diamond 948 133 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;