RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1063685", tax_clade = "FCB group" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA1063685 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30785531 30785531 PRJNA1063685_S_NODE_41254_length_362_cov_1.332180_g40711_i0 PRJNA1063685 41254 362 1.33218 4.8224916 Pseudomonadati 3379134 Bacteria Bacteria 77.8 7.32e-14   NR MCC5914000.1 2053516 g40711 i0 80.5 6.33977900552486 41 8 34 0 298 176 517 557 MCC5914000.1 D-aminoacylase [Balneolaceae bacterium] diamond 2295 77.8 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium
30920411 30920411 PRJNA1063685_S_NODE_6014_length_705_cov_5.876582_g5544_i0 PRJNA1063685 6014 705 5.876582 41.4299031 Fodinibius salicampi 1920655 Bacteria Bacteria 74.3 5.84e-12   NR WP_265790207.1 1920655 g5544 i0 31.6 0.565957446808511 133 87 54.9 4 596 210 8 140 WP_265790207.1 hypothetical protein [Fodinibius salicampi] diamond 399 74.3 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Fodinibius Fodinibius salicampi
31931946 31931946 PRJNA1063685_S_NODE_46137_length_337_cov_2.882576_g45594_i0 PRJNA1063685 46137 337 2.882576 9.71428112 Gracilimonas sp. 1974203 Bacteria Bacteria 155 6.36e-44   NR WP_395084182.1 1974203 g45594 i0 69.5 0.934718100890208 105 32 93.5 0 316 2 129 233 WP_395084182.1 ATP-dependent 6-phosphofructokinase [Gracilimonas sp.] diamond 315 155 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Gracilimonas Gracilimonas sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;