RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1063685", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Aminicenantota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Aminicenantota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1063685 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8665177 8665177 PRJNA1063685_S_NODE_40947_length_363_cov_5.872414_g40404_i0 PRJNA1063685 40947 363 5.872414 21.31686282 Pseudomonadati 3379134 Bacteria Bacteria 134 1.2e-26   NTclustered gi|2874253778|emb|OY969762.1| 2052149 g40404 i0 81.657 80.168044077135 169 24 46 5 180 346 2992860 2992697 MAG: Candidatus Aminicenantes bacterium isolate MFD04408.bin.c.1 genome assembly, chromosome: 1 blastn 29101 134 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
26963769 26963769 PRJNA1063685_S_NODE_9162_length_642_cov_5.970123_g8653_i0 PRJNA1063685 9162 642 5.970123 38.32818966 Bacteria 2 Bacteria Bacteria 143 2.8e-36   NR MBM3293085.1 2052149 g8653 i0 43.9 1.76635514018692 189 105 88.3 1 568 2 288 475 MBM3293085.1 aminoacyl-histidine dipeptidase [Candidatus Aminicenantes bacterium] diamond 1134 143 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;