RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1061474", tax_phylum = "Promethearchaeota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Promethearchaeota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1061474 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28677814 28677814 PRJNA1061474_P_NODE_43887_length_258_cov_1.664865_g43641_i0 PRJNA1061474 43887 258 1.664865 4.2953517 Candidatus Lokiarchaeum ossiferum 2951803 Archaea Archaea 43.1 0.0329   NR UYP47734.1 2951803 g43641 i0 35.4 0.755813953488372 65 40 74.4 2 67 258 224 287 UYP47734.1 Dihydroorotase [Candidatus Lokiarchaeum ossiferum] diamond 195 43.1 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia Promethearchaeales Promethearchaeaceae Candidatus Lokiarchaeum Candidatus Lokiarchaeum ossiferum
32216871 32216871 PRJNA1061474_P_NODE_55298_length_243_cov_0.905882_g55052_i0 PRJNA1061474 55298 243 0.905882 2.20129326 Promethearchaeia archaeon 3067280 Archaea Archaea 105 1.98e-24   NR HME53052.1 3067280 g55052 i0 68.4 0.975308641975309 79 25 97.5 0 2 238 195 273 HME53052.1 ABC transporter ATP-binding protein [Promethearchaeia archaeon] diamond 237 105 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia       Promethearchaeia archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;