RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1061474" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1061474 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
178992 178992 PRJNA1061474_P_NODE_51541_length_246_cov_0.890173_g51295_i0 PRJNA1061474 51541 246 0.890173 2.18982558 Minisyncoccota bacterium 2053589 Bacteria Bacteria 150 3.62e-42   NR HVM77235.1 2053589 g51295 i0 92.6 5.92682926829268 81 6 98.8 0 244 2 32 112 HVM77235.1 redox-regulated ATPase YchF [Candidatus Paceibacterota bacterium] diamond 1458 150 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30730572 30730572 PRJNA1061474_P_NODE_57574_length_241_cov_0.916667_g57328_i0 PRJNA1061474 57574 241 0.916667 2.20916747 Minisyncoccota bacterium 2053589 Bacteria Bacteria 128 3.1699999999999996e-32   NR HRY49085.1 2053589 g57328 i0 74.7 0.983402489626556 79 20 98.3 0 239 3 357 435 HRY49085.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 237 128 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32722326 32722326 PRJNA1061474_P_NODE_49380_length_248_cov_0.880000_g49134_i0 PRJNA1061474 49380 248 0.88 2.1824 Minisyncoccota bacterium 2053589 Bacteria Bacteria 102 2.2799999999999994e-23   NR HEY1037517.1 2053589 g49134 i0 57.3 1.99596774193548 82 35 99.2 0 246 1 143 224 HEY1037517.1 S41 family peptidase [Candidatus Paceibacterota bacterium] diamond 495 102 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;