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contig_metadata

6 rows where bioproject = "PRJNA1061474" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1061474 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26877511 26877511 PRJNA1061474_P_NODE_44241_length_256_cov_1.683060_g43995_i0 PRJNA1061474 44241 256 1.68306 4.3086336 Melioribacteraceae bacterium 2614255 Bacteria Bacteria 63.9 1.49e-9   NR MDQ7817618.1 2614255 g43995 i0 43.8 1.53515625 64 36 75 0 247 56 429 492 MDQ7817618.1 tetratricopeptide repeat protein [Melioribacteraceae bacterium] diamond 393 63.9 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Melioribacteraceae   Melioribacteraceae bacterium
27793738 27793738 PRJNA1061474_P_NODE_54264_length_244_cov_0.900585_g54018_i0 PRJNA1061474 54264 244 0.900585 2.1974274 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 140 1.88e-36   NR MCX6135018.1 2049428 g54018 i0 81.5 1.99180327868852 81 15 99.6 0 244 2 169 249 MCX6135018.1 ATP-dependent DNA helicase RecG [Ignavibacteriales bacterium] diamond 486 140 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium
29750959 29750959 PRJNA1061474_P_NODE_49411_length_248_cov_0.880000_g49165_i0 PRJNA1061474 49411 248 0.88 2.1824 Ignavibacteria bacterium 2053306 Bacteria Bacteria 88.2 4.04e-18   NR MBI1804165.1 2053306 g49165 i0 50.6 0.955645161290323 79 39 95.6 0 5 241 770 848 MBI1804165.1 hypothetical protein [Ignavibacteria bacterium] diamond 237 88.2 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
30509412 30509412 PRJNA1061474_P_NODE_45353_length_251_cov_0.865169_g45107_i0 PRJNA1061474 45353 251 0.865169 2.17157419 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 50.4 7.08e-5   NR MEJ2104840.1 2651163 g45107 i0 51.2 0.51394422310757 43 20 50.2 1 239 114 1 43 MEJ2104840.1 two-component regulator propeller domain-containing protein [Ignavibacteriaceae bacterium] diamond 129 50.4 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium
31773753 31773753 PRJNA1061474_P_NODE_50237_length_247_cov_0.885057_g49991_i0 PRJNA1061474 50237 247 0.885057 2.18609079 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 110 5.6e-26   NR RPI04699.1 2026749 g49991 i0 75.4 1.67611336032389 69 17 83.8 0 245 39 936 1004 RPI04699.1 MAG: 4Fe-4S dicluster domain-containing protein [Ignavibacteriota bacterium] diamond 414 110 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
32185249 32185249 PRJNA1061474_P_NODE_51798_length_246_cov_0.890173_g51552_i0 PRJNA1061474 51798 246 0.890173 2.18982558 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 108 4.81e-26   NR MCX6144305.1 2049428 g51552 i0 94.4 0.658536585365854 54 3 65.9 0 85 246 152 205 MCX6144305.1 prolipoprotein diacylglyceryl transferase [Ignavibacteriales bacterium] diamond 162 108 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;