RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1061474" and tax_phylum = "Fibrobacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fibrobacterota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1061474 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27667503 27667503 PRJNA1061474_P_NODE_50744_length_247_cov_0.885057_g50498_i0 PRJNA1061474 50744 247 0.885057 2.18609079 Chitinivibrionales bacterium 2663014 Bacteria Bacteria 109 1.25e-25   NR MDD5674060.1 2663014 g50498 i0 64.2 0.983805668016194 81 29 98.4 0 245 3 406 486 MDD5674060.1 GTP-binding protein [Chitinivibrionales bacterium] diamond 243 109 1 Bacteria FCB group Pseudomonadati Fibrobacterota Chitinivibrionia Chitinivibrionales     Chitinivibrionales bacterium
30035551 30035551 PRJNA1061474_P_NODE_47231_length_250_cov_0.870056_g46985_i0 PRJNA1061474 47231 250 0.870056 2.17514 Fibrobacterota bacterium 2052160 Bacteria Bacteria 52.4 1.61e-5   NR MBW8886188.1 2052160 g46985 i0 54.2 0.576 48 21 57.6 1 144 1 33 79 MBW8886188.1 hypothetical protein [Fibrobacterota bacterium] diamond 144 52.4 1 Bacteria FCB group Pseudomonadati Fibrobacterota         Fibrobacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;