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contig_metadata

29 rows where bioproject = "PRJNA1061474" and tax_phylum = "Ciliophora"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 29 ✖

tax_clade 1

bioproject 1

  • PRJNA1061474 · 29 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7830352 7830352 PRJNA1061474_P_NODE_14147_length_545_cov_0.788136_g13903_i0 PRJNA1061474 14147 545 0.788136 4.2953412 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 784 0   NTclustered gi|300676719|gb|GQ377693.1| 151077 g13903 i0 92.791 10.6788990825688 541 39 99 0 5 545 558 18 Chilodonella uncinata gcr5-like mRNA, partial sequence blastn 5820 784 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
9939825 9939825 PRJNA1061474_P_NODE_41848_length_269_cov_1.964286_g41602_i0 PRJNA1061474 41848 269 1.964286 5.28392934 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 337 6.069999999999998e-88   NTclustered gi|21215206|gb|AF510205.1| 5947 g41602 i0 89.513 95.9739776951673 267 27 99 1 1 267 1274 1009 Oxytricha granulifera beta-tubulin gene, complete cds blastn 25817 337 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Oxytricha Oxytricha granulifera
14207234 14207234 PRJNA1061474_P_NODE_37592_length_293_cov_0.900000_g37346_i0 PRJNA1061474 37592 293 0.9 2.637 Opisthonecta henneguyi 6026 SAR_Eukaryotes SAR_Eukaryotes 267 8.909999999999999e-67   NTclustered gi|4063597|gb|AF056109.1| 6026 g37346 i0 85.714 74.4232081911263 252 36 86 0 42 293 1 252 Telotrochidium henneguyii translation elongation factor 1-alpha (TEF1) gene, partial cds blastn 21806 267 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Opisthonectidae Opisthonecta Opisthonecta henneguyi
15039342 15039342 PRJNA1061474_P_NODE_38612_length_287_cov_1.439252_g38366_i0 PRJNA1061474 38612 287 1.439252 4.13065324 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 114 3.79e-30   NR CDW85032.1 5949 g38366 i0 63 8.78048780487805 92 34 96.2 0 286 11 37 128 CDW85032.1 histone h2a [Stylonychia lemnae] diamond 2520 115 0.991304347826087 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
15481232 15481232 PRJNA1061474_P_NODE_33533_length_316_cov_1.502058_g33287_i0 PRJNA1061474 33533 316 1.502058 4.74650328 Opisthonecta henneguyi 6026 SAR_Eukaryotes SAR_Eukaryotes 333 9.439999999999998e-87   NTclustered gi|21429687|gb|AY101352.1| 6026 g33287 i0 86.084 97.1867088607595 309 43 98 0 8 316 994 686 Opisthonecta henneguyi alpha-tubulin gene, partial cds blastn 30711 333 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Opisthonectidae Opisthonecta Opisthonecta henneguyi
15481527 15481527 PRJNA1061474_P_NODE_43013_length_263_cov_1.215789_g42767_i0 PRJNA1061474 43013 263 1.215789 3.19752507 Halteria grandinella 5974 SAR_Eukaryotes SAR_Eukaryotes 97.4 1.27e-22   NR TNV76685.1 5974 g42767 i0 58.2 0.901140684410646 79 33 90.1 0 237 1 101 179 TNV76685.1 hypothetical protein FGO68_gene948 [Halteria grandinella] diamond 237 97.4 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Halteriidae Halteria Halteria grandinella
21855426 21855426 PRJNA1061474_P_NODE_38838_length_286_cov_1.244131_g38592_i0 PRJNA1061474 38838 286 1.244131 3.55821466 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 451 2.23e-122   NTclustered gi|110645063|gb|DQ665311.1| 151077 g38592 i0 98.438 95.8321678321678 256 4 90 0 1 256 256 1 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 27408 451 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
26655302 26655302 PRJNA1061474_P_NODE_37401_length_294_cov_1.040724_g37155_i0 PRJNA1061474 37401 294 1.040724 3.05972856 Paramecium pentaurelia 43138 SAR_Eukaryotes SAR_Eukaryotes 54.7 4.25e-6   NR CAD8209359.1 43138 g37155 i0 40.8 1.55102040816327 76 41 77.6 4 292 65 84 155 CAD8209359.1 unnamed protein product [Paramecium pentaurelia] diamond 456 54.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium pentaurelia
26813996 26813996 PRJNA1061474_P_NODE_38621_length_287_cov_1.439252_g38375_i0 PRJNA1061474 38621 287 1.439252 4.13065324 Tetrahymena malaccensis 5901 SAR_Eukaryotes SAR_Eukaryotes 79 6.27e-15   NR KAL4431843.1 5901 g38375 i0 47.8 0.961672473867596 92 46 94.1 1 278 9 7 98 KAL4431843.1 hypothetical protein ABPG74_015283 [Tetrahymena malaccensis] diamond 276 79 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena malaccensis
26877507 26877507 PRJNA1061474_P_NODE_28461_length_351_cov_1.384892_g28215_i0 PRJNA1061474 28461 351 1.384892 4.86097092 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 50.8 1.75e-4   NR XP_001031771.2 312017 g28215 i0 41.4 1.01709401709402 58 31 47 1 337 173 322 379 XP_001031771.2 ferric reductase-like transmembrane component [Tetrahymena thermophila SB210] diamond 357 50.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
26908926 26908926 PRJNA1061474_P_NODE_51302_length_246_cov_0.890173_g51056_i0 PRJNA1061474 51302 246 0.890173 2.18982558 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 94 1.38e-20   NR CDW89969.1 5949 g51056 i0 64 0.914634146341463 75 23 91.5 1 228 4 191 261 CDW89969.1 ras-related protein rab-19 [Stylonychia lemnae] diamond 225 94 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
27256686 27256686 PRJNA1061474_P_NODE_1643_length_1571_cov_1.956609_g1561_i0 PRJNA1061474 1643 1571 1.956609 30.73832739 Philasterides dicentrarchi 282688 SAR_Eukaryotes SAR_Eukaryotes 584 3.39e-205   NR QBC88378.1 282688 g1561 i0 83.7 3.515595162317 344 48 65.7 2 1489 458 1 336 QBC88378.1 NADH-cytochrome b5 reductase 1 [Philasterides dicentrarchi] diamond 5523 584 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Philasteridae Philasterides Philasterides dicentrarchi
27438349 27438349 PRJNA1061474_P_NODE_55603_length_243_cov_0.905882_g55357_i0 PRJNA1061474 55603 243 0.905882 2.20129326 Paramecium 5884 SAR_Eukaryotes SAR_Eukaryotes 110 6.920000000000001e-27   NR CAD8145820.1 43138 g55357 i0 64.9 1.90123456790123 77 27 95.1 0 231 1 224 300 CAD8145820.1 unnamed protein product [Paramecium pentaurelia] diamond 462 110 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium pentaurelia
27635899 27635899 PRJNA1061474_P_NODE_7144_length_819_cov_1.191689_g6936_i0 PRJNA1061474 7144 819 1.191689 9.75993291 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 157 1.1899999999999997e-42   NR XP_004031019.1 5932 g6936 i0 40.6 1.6959706959707 234 135 84.6 4 810 118 1 233 XP_004031019.1 ribosomal protein, putative [Ichthyophthirius multifiliis] diamond 1389 157 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
27856675 27856675 PRJNA1061474_P_NODE_27045_length_363_cov_0.793103_g26799_i0 PRJNA1061474 27045 363 0.793103 2.87896389 Paramecium sonneborni 65129 SAR_Eukaryotes SAR_Eukaryotes 125 6.24e-32   NR CAD8086464.1 65129 g26799 i0 50.4 0.983471074380165 119 55 98.3 2 361 5 113 227 CAD8086464.1 unnamed protein product [Paramecium sonneborni] diamond 357 125 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium sonneborni
28543395 28543395 PRJNA1061474_P_NODE_50807_length_247_cov_0.885057_g50561_i0 PRJNA1061474 50807 247 0.885057 2.18609079 Paramecium 5884 SAR_Eukaryotes SAR_Eukaryotes 82.4 2.79e-16   NR CAD8136818.1 43138 g50561 i0 47.4 1.89473684210526 78 40 93.5 1 17 247 171 248 CAD8136818.1 unnamed protein product [Paramecium pentaurelia] diamond 468 83.2 0.990384615384615 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium pentaurelia
28930337 28930337 PRJNA1061474_P_NODE_23168_length_401_cov_0.939024_g22922_i0 PRJNA1061474 23168 401 0.939024 3.76548624 Blepharisma stoltei 1481888 SAR_Eukaryotes SAR_Eukaryotes 91.7 2.39e-20   NR CAG9335356.1 1481888 g22922 i0 39.6 1.00249376558603 134 72 93.5 2 397 23 35 168 CAG9335356.1 unnamed protein product [Blepharisma stoltei] diamond 402 91.7 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Blepharismidae Blepharisma Blepharisma stoltei
30121884 30121884 PRJNA1061474_P_NODE_50412_length_247_cov_0.885057_g50166_i0 PRJNA1061474 50412 247 0.885057 2.18609079 Oligohymenophorea 6020 SAR_Eukaryotes SAR_Eukaryotes 42.4 0.0474   NR CAD8094763.1 5886 g50166 i0 60 1.2753036437247 35 14 42.5 0 1 105 91 125 CAD8094763.1 unnamed protein product [Paramecium primaurelia] diamond 315 42.4 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium primaurelia
30225030 30225030 PRJNA1061474_P_NODE_9352_length_701_cov_2.261146_g9125_i0 PRJNA1061474 9352 701 2.261146 15.85063346 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 57.8 1.62e-6   NR CDW86772.1 5949 g9125 i0 42 0.427960057061341 100 49 39.8 3 132 410 42 139 CDW86772.1 UNKNOWN [Stylonychia lemnae] diamond 300 57.8 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
30280424 30280424 PRJNA1061474_P_NODE_48072_length_249_cov_0.875000_g47826_i0 PRJNA1061474 48072 249 0.875 2.17875 Paramecium 5884 SAR_Eukaryotes SAR_Eukaryotes 69.7 3.88e-13   NR CAD8050913.1 5886 g47826 i0 48.1 3.60240963855422 77 40 92.8 0 237 7 9 85 CAD8050913.1 unnamed protein product [Paramecium primaurelia] diamond 897 69.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium primaurelia
30604088 30604088 PRJNA1061474_P_NODE_34173_length_312_cov_1.933054_g33927_i0 PRJNA1061474 34173 312 1.933054 6.03112848 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 69.3 1.45e-11   NR XP_001019178.2 312017 g33927 i0 44.6 0.711538461538462 74 41 71.2 0 13 234 161 234 XP_001019178.2 high mobility group (HMG) box protein [Tetrahymena thermophila SB210] diamond 222 69.3 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
30667404 30667404 PRJNA1061474_P_NODE_53033_length_245_cov_0.895349_g52787_i0 PRJNA1061474 53033 245 0.895349 2.19360505 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 42.7 0.0373   NR KRX01183.1 266149 g52787 i0 38.9 0.881632653061225 72 39 88.2 2 3 218 256 322 KRX01183.1 hypothetical protein PPERSA_03687 [Pseudocohnilembus persalinus] diamond 216 42.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
31046835 31046835 PRJNA1061474_P_NODE_57515_length_241_cov_0.916667_g57269_i0 PRJNA1061474 57515 241 0.916667 2.20916747 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 94 3.3e-20   NR XP_004029841.1 5932 g57269 i0 54.4 0.983402489626556 79 36 98.3 0 239 3 273 351 XP_004029841.1 hypothetical protein IMG5_171930 [Ichthyophthirius multifiliis] diamond 237 94 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
31109567 31109567 PRJNA1061474_P_NODE_38615_length_287_cov_1.439252_g38369_i0 PRJNA1061474 38615 287 1.439252 4.13065324 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 48.1 5.84e-4   NR AAW02920.1 5908 g38369 i0 35 0.627177700348432 60 39 62.7 0 265 86 12 71 AAW02920.1 translation elongation factor 1B alpha subunit, partial [Tetrahymena pyriformis] diamond 180 48.1 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
31140917 31140917 PRJNA1061474_P_NODE_44375_length_256_cov_1.153005_g44129_i0 PRJNA1061474 44375 256 1.153005 2.9516928 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 44.7 0.00823   NR KRX09922.1 266149 g44129 i0 63 0.52734375 27 10 31.6 0 185 105 267 293 KRX09922.1 Lysozyme-like domain [Pseudocohnilembus persalinus] diamond 135 44.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
31267781 31267781 PRJNA1061474_P_NODE_45575_length_251_cov_0.865169_g45329_i0 PRJNA1061474 45575 251 0.865169 2.17157419 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 69.7 1.27e-11   NR KRX02716.1 266149 g45329 i0 42.7 0.9800796812749 82 47 98 0 249 4 315 396 KRX02716.1 hypothetical protein PPERSA_01833 [Pseudocohnilembus persalinus] diamond 246 69.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
32090234 32090234 PRJNA1061474_P_NODE_28158_length_354_cov_0.807829_g27912_i0 PRJNA1061474 28158 354 0.807829 2.85971466 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 60.8 5.65e-8   NR XP_004030818.1 5932 g27912 i0 33.6 0.983050847457627 116 74 97.5 2 346 2 153 266 XP_004030818.1 nuclease domain protein 1 [Ichthyophthirius multifiliis] diamond 348 60.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
32619560 32619560 PRJNA1061474_P_NODE_54520_length_244_cov_0.900585_g54274_i0 PRJNA1061474 54520 244 0.900585 2.1974274 Paramecium 5884 SAR_Eukaryotes SAR_Eukaryotes 98.2 2.69e-23   NR CAD8064403.1 5886 g54274 i0 65.1 12.0737704918033 83 26 99.6 2 2 244 26 107 CAD8064403.1 unnamed protein product [Paramecium primaurelia] diamond 2946 98.6 0.995943204868154 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium primaurelia
32690637 32690637 PRJNA1061474_P_NODE_48140_length_249_cov_0.875000_g47894_i0 PRJNA1061474 48140 249 0.875 2.17875 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 82.8 8.54e-17   NR KRX10580.1 266149 g47894 i0 49.3 0.903614457831325 75 38 90.4 0 225 1 133 207 KRX10580.1 hypothetical protein PPERSA_05400 [Pseudocohnilembus persalinus] diamond 225 82.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;