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contig_metadata

10 rows where bioproject = "PRJNA1061474" and tax_phylum = "Candidatus Rokuibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Rokuibacteriota · 10 ✖

tax_clade 1

bioproject 1

  • PRJNA1061474 · 10 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10382153 10382153 PRJNA1061474_P_NODE_49029_length_248_cov_0.880000_g48783_i0 PRJNA1061474 49029 248 0.88 2.1824 Bacteria 2 Bacteria Bacteria 147 2.88e-42   NR PYM46538.1 2053607 g48783 i0 90.2 1.98387096774194 82 8 99.2 0 247 2 19 100 PYM46538.1 MAG: YebC/PmpR family DNA-binding transcriptional regulator [Candidatus Rokuibacteriota bacterium] diamond 492 147 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
10382162 10382162 PRJNA1061474_P_NODE_49589_length_248_cov_0.880000_g49343_i0 PRJNA1061474 49589 248 0.88 2.1824 Bacillati 1783272 Bacteria Bacteria 135 8.8e-35   NR PYN36321.1 2053607 g49343 i0 82.9 4.95967741935484 82 14 99.2 0 3 248 164 245 PYN36321.1 MAG: ABC transporter ATP-binding protein [Candidatus Rokuibacteriota bacterium] diamond 1230 135 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
14207760 14207760 PRJNA1061474_P_NODE_56712_length_242_cov_0.911243_g56466_i0 PRJNA1061474 56712 242 0.911243 2.20520806 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 112 2.0800000000000004e-27   NR PYN09329.1 2053607 g56466 i0 75 1.98347107438017 80 20 99.2 0 241 2 104 183 PYN09329.1 MAG: hypothetical protein DME02_03895 [Candidatus Rokuibacteriota bacterium] diamond 480 112 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
15039356 15039356 PRJNA1061474_P_NODE_45792_length_251_cov_0.865169_g45546_i0 PRJNA1061474 45792 251 0.865169 2.17157419 Bacteria 2 Bacteria Bacteria 159 9.839999999999999e-47   NR PYO13204.1 2053607 g45546 i0 97.6 2.97609561752988 83 2 99.2 0 2 250 153 235 PYO13204.1 MAG: Fe-S-binding domain-containing protein, partial [Candidatus Rokuibacteriota bacterium] diamond 747 159 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
16755864 16755864 PRJNA1061474_P_NODE_50834_length_247_cov_0.885057_g50588_i0 PRJNA1061474 50834 247 0.885057 2.18609079 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 159 1.45e-45   NR MBI4594422.1 2053607 g50588 i0 93.8 0.983805668016194 81 5 98.4 0 244 2 102 182 MBI4594422.1 IS630 family transposase [Candidatus Rokuibacteriota bacterium] diamond 243 159 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
28962095 28962095 PRJNA1061474_P_NODE_45328_length_251_cov_0.865169_g45082_i0 PRJNA1061474 45328 251 0.865169 2.17157419 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 142 4.429999999999999e-42   NR TMQ21864.1 2053607 g45082 i0 84.3 0.99203187250996006 83 13 99.2 0 250 2 12 94 TMQ21864.1 MAG: hypothetical protein E6K82_14460 [Candidatus Rokuibacteriota bacterium] diamond 249 142 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
29711038 29711038 PRJNA1061474_P_NODE_55210_length_243_cov_0.905882_g54964_i0 PRJNA1061474 55210 243 0.905882 2.20129326 Bacteria 2 Bacteria Bacteria 147 4.1e-40   NR MBI1728354.1 2053607 g54964 i0 96.3 13 81 3 100 0 1 243 233 313 MBI1728354.1 VWA domain-containing protein [Candidatus Rokuibacteriota bacterium] diamond 3159 148 0.993243243243243 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
30698899 30698899 PRJNA1061474_P_NODE_51374_length_246_cov_0.890173_g51128_i0 PRJNA1061474 51374 246 0.890173 2.18982558 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 119 5.31e-30   NR MDO8478382.1 2053607 g51128 i0 69.1 2.96341463414634 81 25 98.8 0 2 244 75 155 MDO8478382.1 phosphotransferase family protein [Candidatus Rokuibacteriota bacterium] diamond 729 119 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
31394456 31394456 PRJNA1061474_P_NODE_54116_length_244_cov_0.900585_g53870_i0 PRJNA1061474 54116 244 0.900585 2.1974274 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 120 1.83e-30   NR PWU17793.1 2053607 g53870 i0 69.1 0.995901639344262 81 25 99.6 0 244 2 295 375 PWU17793.1 MAG: branched-chain amino acid ABC transporter substrate-binding protein [Candidatus Rokuibacteriota bacterium] diamond 243 120 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
31963563 31963563 PRJNA1061474_P_NODE_51858_length_246_cov_0.890173_g51612_i0 PRJNA1061474 51858 246 0.890173 2.18982558 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 152 2.39e-44   NR PYM23351.1 2053607 g51612 i0 88.9 0.98780487804878 81 9 98.8 0 245 3 41 121 PYM23351.1 MAG: hypothetical protein DMD80_26420 [Candidatus Rokuibacteriota bacterium] diamond 243 152 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;