RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

21 rows where bioproject = "PRJNA1061474" and tax_phylum = "Candidatus Methylomirabilota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 21 ✖

tax_clade 1

bioproject 1

  • PRJNA1061474 · 21 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2729549 2729549 PRJNA1061474_P_NODE_55663_length_243_cov_0.905882_g55417_i0 PRJNA1061474 55663 243 0.905882 2.20129326 uncultured Methylomirabilota bacterium 991135 Bacteria Bacteria 261 3.34e-65   NTclustered gi|2874253892|emb|OY970067.1| 991135 g55417 i0 86.008 1.73251028806584 243 34 100 0 1 243 5267998 5267756 MAG: uncultured candidate division NC10 bacterium isolate MFD01231.bin.c.1 genome assembly, chromosome: 1 blastn 421 261 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         uncultured Methylomirabilota bacterium
7831582 7831582 PRJNA1061474_P_NODE_53307_length_245_cov_0.895349_g53061_i0 PRJNA1061474 53307 245 0.895349 2.19360505 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 120 2.26e-33   NR HEV3349711.1 2072417 g53061 i0 96.8 0.771428571428571 63 2 77.1 0 243 55 51 113 HEV3349711.1 YbjQ family protein [Candidatus Methylomirabilota bacterium] diamond 189 120 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
11215122 11215122 PRJNA1061474_P_NODE_56009_length_242_cov_0.911243_g55763_i0 PRJNA1061474 56009 242 0.911243 2.20520806 Candidatus Methylomirabilis sp. 2032687 Bacteria Bacteria 67.8 5.57e-11   NR HEV8662939.1 2032687 g55763 i0 45.5 11.9132231404959 88 39 99.2 4 242 3 347 433 HEV8662939.1 FG-GAP-like repeat-containing protein [Candidatus Methylomirabilis sp.] diamond 2883 67.8 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota Candidatus Methylomirabilia Candidatus Methylomirabilales Candidatus Methylomirabilaceae Candidatus Methylomirabilis Candidatus Methylomirabilis sp.
15481674 15481674 PRJNA1061474_P_NODE_48573_length_249_cov_0.875000_g48327_i0 PRJNA1061474 48573 249 0.875 2.17875 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 144 2.59e-38   NR HWO04068.1 2072417 g48327 i0 96.4 4 83 3 100 0 249 1 290 372 HWO04068.1 efflux RND transporter permease subunit [Candidatus Methylomirabilota bacterium] diamond 996 144 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
21855805 21855805 PRJNA1061474_P_NODE_51698_length_246_cov_0.890173_g51452_i0 PRJNA1061474 51698 246 0.890173 2.18982558 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 65.5 3.23e-10   NR HWO45788.1 2072417 g51452 i0 91.2 0.414634146341463 34 3 41.5 0 144 245 1 34 HWO45788.1 LLM class flavin-dependent oxidoreductase [Candidatus Methylomirabilota bacterium] diamond 102 65.5 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
23131277 23131277 PRJNA1061474_P_NODE_52459_length_245_cov_0.895349_g52213_i0 PRJNA1061474 52459 245 0.895349 2.19360505 uncultured Methylomirabilota bacterium 991135 Bacteria Bacteria 226 1.23e-54   NTclustered gi|2874253892|emb|OY970067.1| 991135 g52213 i0 83.401 33.1959183673469 247 37 100 2 1 245 4804343 4804099 MAG: uncultured candidate division NC10 bacterium isolate MFD01231.bin.c.1 genome assembly, chromosome: 1 blastn 8133 226 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         uncultured Methylomirabilota bacterium
23964143 23964143 PRJNA1061474_P_NODE_56899_length_242_cov_0.911243_g56653_i0 PRJNA1061474 56899 242 0.911243 2.20520806 Candidatus Methylomirabilis sp. 2032687 Bacteria Bacteria 154 1.55e-44   NR HSB71748.1 2032687 g56653 i0 82.5 0.991735537190083 80 14 99.2 0 242 3 122 201 HSB71748.1 MBL fold metallo-hydrolase [Candidatus Methylomirabilis sp.] diamond 240 154 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota Candidatus Methylomirabilia Candidatus Methylomirabilales Candidatus Methylomirabilaceae Candidatus Methylomirabilis Candidatus Methylomirabilis sp.
27469763 27469763 PRJNA1061474_P_NODE_54503_length_244_cov_0.900585_g54257_i0 PRJNA1061474 54503 244 0.900585 2.1974274 Bacteria 2 Bacteria Bacteria 138 7.23e-36   NR HZF02001.1 2072417 g54257 i0 79 1.99180327868852 81 17 99.6 0 243 1 338 418 HZF02001.1 c-type cytochrome domain-containing protein [Candidatus Methylomirabilota bacterium] diamond 486 138 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
27983054 27983054 PRJNA1061474_P_NODE_56405_length_242_cov_0.911243_g56159_i0 PRJNA1061474 56405 242 0.911243 2.20520806 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 78.6 3.61e-15   NR HTZ33565.1 2072417 g56159 i0 83.7 1.21487603305785 49 8 60.7 0 95 241 1 49 HTZ33565.1 hypothetical protein [Candidatus Methylomirabilota bacterium] diamond 294 78.6 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
28077691 28077691 PRJNA1061474_P_NODE_56045_length_242_cov_0.911243_g55799_i0 PRJNA1061474 56045 242 0.911243 2.20520806 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 127 4.65e-33   NR MBI4734803.1 2072417 g55799 i0 76.3 0.991735537190083 80 19 99.2 0 3 242 6 85 MBI4734803.1 glycosyltransferase family 9 protein [Candidatus Methylomirabilota bacterium] diamond 240 127 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
28709423 28709423 PRJNA1061474_P_NODE_55447_length_243_cov_0.905882_g55201_i0 PRJNA1061474 55447 243 0.905882 2.20129326 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 69.7 5.8e-12   NR HUO41994.1 2072417 g55201 i0 47.5 0.753086419753086 61 32 75.3 0 242 60 214 274 HUO41994.1 PHB depolymerase family esterase [Candidatus Methylomirabilota bacterium] diamond 183 69.7 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
29088282 29088282 PRJNA1061474_P_NODE_45408_length_251_cov_0.865169_g45162_i0 PRJNA1061474 45408 251 0.865169 2.17157419 Candidatus Methylomirabilales bacterium 3159508 Bacteria Bacteria 146 4.85e-42   NR MFI5341585.1 3159508 g45162 i0 84.3 0.99203187250996006 83 13 99.2 0 3 251 124 206 MFI5341585.1 three-Cys-motif partner protein TcmP [Candidatus Methylomirabilales bacterium] diamond 249 146 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota Candidatus Methylomirabilia Candidatus Methylomirabilales     Candidatus Methylomirabilales bacterium
30035556 30035556 PRJNA1061474_P_NODE_49191_length_248_cov_0.880000_g48945_i0 PRJNA1061474 49191 248 0.88 2.1824 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 162 1.04e-47   NR HWN58075.1 2072417 g48945 i0 98.8 0.991935483870968 82 1 99.2 0 1 246 56 137 HWN58075.1 protein phosphatase 2C domain-containing protein [Candidatus Methylomirabilota bacterium] diamond 246 162 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
30161634 30161634 PRJNA1061474_P_NODE_50012_length_247_cov_0.885057_g49766_i0 PRJNA1061474 50012 247 0.885057 2.18609079 Candidatus Methylomirabilis sp. 2032687 Bacteria Bacteria 79 1.49e-16   NR HSB82279.1 2032687 g49766 i0 56.9 0.789473684210526 65 28 78.9 0 46 240 15 79 HSB82279.1 EF-hand domain-containing protein [Candidatus Methylomirabilis sp.] diamond 195 79 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota Candidatus Methylomirabilia Candidatus Methylomirabilales Candidatus Methylomirabilaceae Candidatus Methylomirabilis Candidatus Methylomirabilis sp.
30477942 30477942 PRJNA1061474_P_NODE_57233_length_241_cov_0.916667_g56987_i0 PRJNA1061474 57233 241 0.916667 2.20916747 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 68.9 1.7e-11   NR HEY7600947.1 2072417 g56987 i0 66.1 0.697095435684647 56 19 69.7 0 168 1 11 66 HEY7600947.1 methyltransferase [Candidatus Methylomirabilota bacterium] diamond 168 68.9 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
30793697 30793697 PRJNA1061474_P_NODE_53914_length_244_cov_0.900585_g53668_i0 PRJNA1061474 53914 244 0.900585 2.1974274 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 157 1.32e-46   NR HEV8227451.1 2072417 g53668 i0 96.3 1.9672131147541 80 3 98.4 0 242 3 117 196 HEV8227451.1 hypothetical protein [Candidatus Methylomirabilota bacterium] diamond 480 157 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
31330943 31330943 PRJNA1061474_P_NODE_46636_length_250_cov_0.870056_g46390_i0 PRJNA1061474 46636 250 0.870056 2.17514 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 114 1.7600000000000003e-27   NR HYT42070.1 2072417 g46390 i0 65.1 1.992 83 29 99.6 0 2 250 158 240 HYT42070.1 hypothetical protein [Candidatus Methylomirabilota bacterium] diamond 498 114 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
31354495 31354495 PRJNA1061474_P_NODE_58016_length_241_cov_0.916667_g57770_i0 PRJNA1061474 58016 241 0.916667 2.20916747 Pseudomonadati 3379134 Bacteria Bacteria 153 4.84e-44   NR HYA97813.1 2072417 g57770 i0 95 13.9170124481328 80 4 99.6 0 240 1 115 194 HYA97813.1 type II secretion system F family protein [Candidatus Methylomirabilota bacterium] diamond 3354 154 0.993506493506494 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
31860302 31860302 PRJNA1061474_P_NODE_55317_length_243_cov_0.905882_g55071_i0 PRJNA1061474 55317 243 0.905882 2.20129326 Pseudomonadati 3379134 Bacteria Bacteria 162 2.3599999999999998e-48   NR HWP76540.1 2072417 g55071 i0 93.8 4 81 5 100 0 243 1 4 84 HWP76540.1 ABC transporter substrate-binding protein [Candidatus Methylomirabilota bacterium] diamond 972 162 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
32533431 32533431 PRJNA1061474_P_NODE_51199_length_246_cov_0.890173_g50953_i0 PRJNA1061474 51199 246 0.890173 2.18982558 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 154 1.93e-41   NR HTZ31520.1 2072417 g50953 i0 88.9 1.97560975609756 81 9 98.8 0 2 244 199 279 HTZ31520.1 carboxypeptidase regulatory-like domain-containing protein [Candidatus Methylomirabilota bacterium] diamond 486 154 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
32785112 32785112 PRJNA1061474_P_NODE_58020_length_241_cov_0.916667_g57774_i0 PRJNA1061474 58020 241 0.916667 2.20916747 Candidatus Methylomirabilis sp. 2032687 Bacteria Bacteria 72.8 8.64e-13   NR HSB80897.1 2032687 g57774 i0 63.1 0.809128630705394 65 23 80.9 1 196 2 230 293 HSB80897.1 hypothetical protein [Candidatus Methylomirabilis sp.] diamond 195 72.8 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota Candidatus Methylomirabilia Candidatus Methylomirabilales Candidatus Methylomirabilaceae Candidatus Methylomirabilis Candidatus Methylomirabilis sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;