RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1061474" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1061474 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32271960 32271960 PRJNA1061474_P_NODE_24478_length_387_cov_1.038217_g24232_i0 PRJNA1061474 24478 387 1.038217 4.01789979 Theileria 5873 SAR_Eukaryotes SAR_Eukaryotes 45.8 0.0134   NR XP_954555.1 5874 g24232 i0 38.3 1.85271317829457 60 37 46.5 0 156 335 338 397 XP_954555.1 MORM repeat family protein, putative [Theileria annulata] diamond 717 45.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria annulata
32430108 32430108 PRJNA1061474_P_NODE_55259_length_243_cov_0.905882_g55013_i0 PRJNA1061474 55259 243 0.905882 2.20129326 Plasmodiidae 1639119 SAR_Eukaryotes SAR_Eukaryotes 58.9 7.49e-8   NR XP_034421711.1 5823 g55013 i0 38 1.91358024691358 79 48 97.5 1 243 7 495 572 XP_034421711.1 endonuclease/exonuclease/phosphatase family protein, putative [Plasmodium berghei ANKA] diamond 465 59.3 0.993254637436762 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium berghei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;