contig_metadata
8 rows where bioproject = "PRJNA1061474", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4005461 | 4005461 | PRJNA1061474_P_NODE_54044_length_244_cov_0.900585_g53798_i0 | PRJNA1061474 | 54044 | 244 | 0.900585 | 2.1974274 | Bdellovibrio sp. HCB337 | 3394358 | Bacteria | Bacteria | 331 | 2.5200000000000006e-86 | NTclustered | gi|2895525383|gb|CP178621.1| | 3394358 | g53798 | i0 | 91.358 | 195.459016393443 | 243 | 20 | 99 | 1 | 1 | 242 | 3446255 | 3446497 | Bdellovibrio sp. HCB337 chromosome, complete genome | blastn | 47692 | 331 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB337 | ||
| 19304746 | 19304746 | PRJNA1061474_P_NODE_55456_length_243_cov_0.905882_g55210_i0 | PRJNA1061474 | 55456 | 243 | 0.905882 | 2.20129326 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 115 | 2.06e-28 | NR | MCB0341143.1 | 2053517 | g55210 | i0 | 65.4 | 3.96296296296296 | 81 | 28 | 100 | 0 | 243 | 1 | 326 | 406 | MCB0341143.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 963 | 115 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 25237942 | 25237942 | PRJNA1061474_P_NODE_40480_length_277_cov_1.132353_g40234_i0 | PRJNA1061474 | 40480 | 277 | 1.132353 | 3.13661781 | Bacteriovorax | 146784 | Bacteria | Bacteria | 512 | 9.73e-141 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g40234 | i0 | 100 | 132.274368231047 | 277 | 0 | 100 | 0 | 1 | 277 | 1661764 | 1662040 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 36640 | 512 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 27415018 | 27415018 | PRJNA1061474_P_NODE_8403_length_746_cov_2.369985_g8183_i0 | PRJNA1061474 | 8403 | 746 | 2.369985 | 17.6800881 | Bacteriovorax sp. | 2608087 | Bacteria | Bacteria | 49.7 | 0.00594 | NR | MBC7714774.1 | 2608087 | g8183 | i0 | 26.4 | 0.442359249329759 | 110 | 76 | 42.6 | 2 | 351 | 668 | 266 | 374 | MBC7714774.1 class I SAM-dependent rRNA methyltransferase [Bacteriovorax sp.] | diamond | 330 | 49.7 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax sp. | ||
| 28172422 | 28172422 | PRJNA1061474_P_NODE_48326_length_249_cov_0.875000_g48080_i0 | PRJNA1061474 | 48326 | 249 | 0.875 | 2.17875 | Pseudobdellovibrionaceae bacterium | 2026715 | Bacteria | Bacteria | 93.2 | 9.55e-21 | NR | MEZ0391410.1 | 2026715 | g48080 | i0 | 58.8 | 1.02409638554217 | 85 | 29 | 95.2 | 1 | 1 | 237 | 21 | 105 | MEZ0391410.1 RsmB/NOP family class I SAM-dependent RNA methyltransferase [Pseudobdellovibrionaceae bacterium] | diamond | 255 | 93.2 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 29088281 | 29088281 | PRJNA1061474_P_NODE_32588_length_322_cov_1.489960_g32342_i0 | PRJNA1061474 | 32588 | 322 | 1.48996 | 4.7976712 | Silvanigrellaceae bacterium | 2654442 | Bacteria | Bacteria | 72.8 | 1.63e-14 | NR | MBX9703359.1 | 2654442 | g32342 | i0 | 53.3 | 0.559006211180124 | 60 | 24 | 52.2 | 1 | 155 | 322 | 1 | 60 | MBX9703359.1 hypothetical protein [Silvanigrellaceae bacterium] | diamond | 180 | 72.8 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Silvanigrellales | Silvanigrellaceae | Silvanigrellaceae bacterium | |||
| 31164380 | 31164380 | PRJNA1061474_P_NODE_53155_length_245_cov_0.895349_g52909_i0 | PRJNA1061474 | 53155 | 245 | 0.895349 | 2.19360505 | Bacteria | 2 | Bacteria | Bacteria | 145 | 9.659999999999999e-40 | NR | MAV91884.1 | 2026715 | g52909 | i0 | 85.2 | 4.95918367346939 | 81 | 12 | 99.2 | 0 | 245 | 3 | 247 | 327 | MAV91884.1 preprotein translocase subunit SecY [Pseudobdellovibrionaceae bacterium] | diamond | 1215 | 145 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 31931917 | 31931917 | PRJNA1061474_P_NODE_51497_length_246_cov_0.890173_g51251_i0 | PRJNA1061474 | 51497 | 246 | 0.890173 | 2.18982558 | Pseudobdellovibrio sp. | 2862747 | Bacteria | Bacteria | 100 | 1.92e-22 | NR | MCC2678077.1 | 2862747 | g51251 | i0 | 63 | 0.98780487804878 | 81 | 30 | 98.8 | 0 | 246 | 4 | 419 | 499 | MCC2678077.1 large repetitive protein [Pseudobdellovibrio sp.] | diamond | 243 | 100 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;