RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1061474", tax_kingdom = "Methanobacteriati" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 4 ✖

tax_kingdom 1

  • Methanobacteriati · 4 ✖

bioproject 1

  • PRJNA1061474 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4005523 4005523 PRJNA1061474_P_NODE_56324_length_242_cov_0.911243_g56078_i0 PRJNA1061474 56324 242 0.911243 2.20520806 Candidatus Lutacidiplasmatales archaeon 3345206 Archaea Archaea 109 2.79e-26   NR MFI5413169.1 3345206 g56078 i0 68.8 1.98347107438017 80 25 99.2 0 240 1 313 392 MFI5413169.1 trans-sulfuration enzyme family protein [Candidatus Lutacidiplasmatales archaeon] diamond 480 109 1 Archaea   Methanobacteriati Thermoplasmatota   Candidatus Lutacidiplasmatales     Candidatus Lutacidiplasmatales archaeon
28322090 28322090 PRJNA1061474_P_NODE_48166_length_249_cov_0.875000_g47920_i0 PRJNA1061474 48166 249 0.875 2.17875 Archaea 2157 Archaea Archaea 122 1.42e-30   NR MCJ7464242.1 1906666 g47920 i0 74.4 1.97590361445783 82 21 98.8 0 247 2 298 379 MCJ7464242.1 hypothetical protein [Thermoplasmata archaeon] diamond 492 123 0.991869918699187 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
28677828 28677828 PRJNA1061474_P_NODE_53727_length_244_cov_0.900585_g53481_i0 PRJNA1061474 53727 244 0.900585 2.1974274 Thermoplasmata archaeon 1906666 Archaea Archaea 128 3.3099999999999995e-32   NR HJX04969.1 1906666 g53481 i0 82.5 1.95491803278689 80 14 98.4 0 3 242 554 633 HJX04969.1 GAF domain-containing protein [Thermoplasmata archaeon] diamond 477 128 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
31615680 31615680 PRJNA1061474_P_NODE_48156_length_249_cov_0.875000_g47910_i0 PRJNA1061474 48156 249 0.875 2.17875 Thermoplasmatota archaeon 2806419 Archaea Archaea 137 1.06e-36   NR MBU0684409.1 2806419 g47910 i0 89 1.97590361445783 82 9 98.8 0 2 247 347 428 MBU0684409.1 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein [Thermoplasmatota archaeon] diamond 492 137 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;