RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA1061474", tax_clade = "Stenosarchaea group" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 7 ✖

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 7 ✖

bioproject 1

  • PRJNA1061474 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2729353 2729353 PRJNA1061474_P_NODE_48063_length_249_cov_0.875000_g47817_i0 PRJNA1061474 48063 249 0.875 2.17875 Methanomicrobiales archaeon 2184052 Archaea Archaea 144 4.56e-39   NR HMA05958.1 2184052 g47817 i0 86.6 0.987951807228916 82 11 98.8 0 2 247 51 132 HMA05958.1 phosphomethylpyrimidine synthase ThiC [Methanomicrobiales archaeon] diamond 246 144 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales     Methanomicrobiales archaeon
19304508 19304508 PRJNA1061474_P_NODE_45676_length_251_cov_0.865169_g45430_i0 PRJNA1061474 45676 251 0.865169 2.17157419 Methanocella paludicola 570267 Archaea Archaea 353 5.569999999999998e-93   NTclustered gi|282154984|dbj|AP011532.1| 304371 g45430 i0 92.032 2.21513944223108 251 20 100 0 1 251 2650432 2650682 Methanocella paludicola SANAE DNA, complete genome blastn 556 353 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanocellales Methanocellaceae Methanocella Methanocella paludicola
28858806 28858806 PRJNA1061474_P_NODE_51128_length_246_cov_0.890173_g50882_i0 PRJNA1061474 51128 246 0.890173 2.18982558 Methanocella 570266 Archaea Archaea 43.9 0.00221   NR WP_128860083.1 570267 g50882 i0 88 0.914634146341463 25 3 30.5 0 76 2 1 25 WP_128860083.1 hypothetical protein [Methanocella paludicola] diamond 225 44.3 0.99097065462754 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanocellales Methanocellaceae Methanocella Methanocella paludicola
29530244 29530244 PRJNA1061474_P_NODE_50350_length_247_cov_0.885057_g50104_i0 PRJNA1061474 50350 247 0.885057 2.18609079 Methanocella arvoryzae 1175445 Archaea Archaea 91.7 5.8800000000000005e-21   NR WP_012036701.1 1175445 g50104 i0 55.8 0.935222672064777 77 34 93.5 0 245 15 16 92 WP_012036701.1 DUF7287 family protein [Methanocella arvoryzae] diamond 231 91.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanocellales Methanocellaceae Methanocella Methanocella arvoryzae
30129910 30129910 PRJNA1061474_P_NODE_49272_length_248_cov_0.880000_g49026_i0 PRJNA1061474 49272 248 0.88 2.1824 Methanoregula sp. 2052170 Archaea Archaea 144 2.76e-40   NR MDD3137330.1 2052170 g49026 i0 79.3 2.9758064516129 82 17 99.2 0 246 1 58 139 MDD3137330.1 phosphoesterase [Methanoregula sp.] diamond 738 144 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula Methanoregula sp.
31014932 31014932 PRJNA1061474_P_NODE_51955_length_246_cov_0.890173_g51709_i0 PRJNA1061474 51955 246 0.890173 2.18982558 Methanothrix sp. 90426 Archaea Archaea 68.9 2.27e-11   NR MBK7386536.1 90426 g51709 i0 63.3 0.597560975609756 49 18 59.8 0 245 99 157 205 MBK7386536.1 C39 family peptidase [Methanothrix sp.] diamond 147 68.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
31742090 31742090 PRJNA1061474_P_NODE_47797_length_249_cov_0.875000_g47551_i0 PRJNA1061474 47797 249 0.875 2.17875 Methanoregulaceae archaeon 2485498 Archaea Archaea 111 6.4000000000000005e-27   NR HVP94101.1 2485498 g47551 i0 92.9 0.674698795180723 56 4 67.5 0 168 1 1 56 HVP94101.1 4Fe-4S binding protein [Methanoregulaceae archaeon] diamond 168 111 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae   Methanoregulaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;