RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1061474", tax_clade = "Nitrospinota/Tectimicrobiota group" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 2 ✖

tax_kingdom 1

tax_clade 1

  • Nitrospinota/Tectimicrobiota group · 2 ✖

bioproject 1

  • PRJNA1061474 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26932327 26932327 PRJNA1061474_P_NODE_49402_length_248_cov_0.880000_g49156_i0 PRJNA1061474 49402 248 0.88 2.1824 Pseudomonadati 3379134 Bacteria Bacteria 71.6 6.52e-13   NR ETW92303.1 1429438 g49156 i0 56.9 1.22177419354839 51 22 61.7 0 3 155 177 227 ETW92303.1 MAG: hypothetical protein ETSY1_44230, partial [Candidatus Entotheonella factor] diamond 303 72 0.994444444444444 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota Candidatus Entotheonellia Candidatus Entotheonellales Candidatus Entotheonellaceae Candidatus Entotheonella Candidatus Entotheonella factor
32745621 32745621 PRJNA1061474_P_NODE_51920_length_246_cov_0.890173_g51674_i0 PRJNA1061474 51920 246 0.890173 2.18982558 Pseudomonadati 3379134 Bacteria Bacteria 87.8 5.22e-18   NR HSF29293.1 2528274 g51674 i0 57.1 2.85365853658537 77 33 93.9 0 8 238 513 589 HSF29293.1 SpoIIE family protein phosphatase [Candidatus Tectimicrobiota bacterium] diamond 702 87.8 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota         Candidatus Tectimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;