RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1061474", tax_clade = "Metamonada" and tax_superkingdom = "Eukaryota"

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tax_phylum 3

tax_superkingdom 1

  • Eukaryota · 4 ✖

tax_clade 1

  • Metamonada · 4 ✖

bioproject 1

  • PRJNA1061474 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26908918 26908918 PRJNA1061474_P_NODE_44662_length_254_cov_1.276243_g44416_i0 PRJNA1061474 44662 254 1.276243 3.24165722 Streblomastix strix 222440 Preaxostyla other_Eukaryota 44.7 0.00874   NR KAA6370814.1 222440 g44416 i0 36.1 0.720472440944882 61 39 72 0 54 236 2 62 KAA6370814.1 MAG: hypothetical protein EZS28_033660 [Streblomastix strix] diamond 183 44.7 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
28835528 28835528 PRJNA1061474_P_NODE_40468_length_277_cov_1.147059_g40222_i0 PRJNA1061474 40468 277 1.147059 3.17735343 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 77.4 3.6e-14   NR KAJ4460739.1 342808 g40222 i0 40.7 0.985559566787004 91 47 91 2 23 274 43 133 KAJ4460739.1 putative Phospholipase B [Paratrimastix pyriformis] diamond 273 77.4 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
28993726 28993726 PRJNA1061474_P_NODE_50208_length_247_cov_0.885057_g49962_i0 PRJNA1061474 50208 247 0.885057 2.18609079 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 69.3 1.58e-11   NR XP_068353671.1 1144522 g49962 i0 65.9 3.07287449392713 44 15 53.4 0 179 48 271 314 XP_068353671.1 Serine/threonine-protein kinase Sgk2 [Tritrichomonas foetus] diamond 759 69.3 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
32650810 32650810 PRJNA1061474_P_NODE_56820_length_242_cov_0.911243_g56574_i0 PRJNA1061474 56820 242 0.911243 2.20520806 Hexamitidae 5739 Fornicata other_Eukaryota 53.5 5.94e-6   NR ESU42763.1 5741 g56574 i0 32.7 2.82644628099174 101 45 99.2 3 242 3 2272 2370 ESU42763.1 Variant-specific surface protein [Giardia intestinalis] diamond 684 53.5 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;