RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1061474", tax_clade = "Cyanobacteriota/Melainabacteria group" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 3 ✖

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 3 ✖

bioproject 1

  • PRJNA1061474 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28993725 28993725 PRJNA1061474_P_NODE_50008_length_247_cov_0.885057_g49762_i0 PRJNA1061474 50008 247 0.885057 2.18609079 Vampirovibrio sp. 2717857 Bacteria Bacteria 97.4 2.62e-22   NR MCE3235059.1 2717857 g49762 i0 68.3 0.995951417004049 82 25 99.6 1 247 2 117 197 MCE3235059.1 fliC [Vampirovibrio sp.] diamond 246 97.4 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria Vampirovibriophyceae Vampirovibrionales   Vampirovibrio Vampirovibrio sp.
30951948 30951948 PRJNA1061474_P_NODE_48534_length_249_cov_0.875000_g48288_i0 PRJNA1061474 48534 249 0.875 2.17875 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 117 2.17e-28   NR MFA6210452.1 2364082 g48288 i0 65.4 0.975903614457831 81 28 97.6 0 248 6 28 108 MFA6210452.1 efflux RND transporter permease subunit [Candidatus Obscuribacterales bacterium] diamond 243 117 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
31963559 31963559 PRJNA1061474_P_NODE_49098_length_248_cov_0.880000_g48852_i0 PRJNA1061474 49098 248 0.88 2.1824 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 43.5 0.0212   NR MFN8551917.1 2364082 g48852 i0 41.2 0.616935483870968 51 30 61.7 0 215 63 251 301 MFN8551917.1 hypothetical protein [Candidatus Obscuribacterales bacterium] diamond 153 43.5 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;