RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA1061474", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Sumerlaeota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Sumerlaeota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA1061474 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14207687 14207687 PRJNA1061474_P_NODE_53852_length_244_cov_0.900585_g53606_i0 PRJNA1061474 53852 244 0.900585 2.1974274 candidate division BRC1 bacterium ADurb.BinA292 1852824 Bacteria Bacteria 94.7 5.27e-21   NR OPZ08182.1 1852824 g53606 i0 79.3 0.713114754098361 58 12 71.3 0 2 175 212 269 OPZ08182.1 MAG: putative inorganic polyphosphate/ATP-NAD kinase [candidate division BRC1 bacterium ADurb.BinA292] diamond 174 94.7 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         candidate division BRC1 bacterium ADurb.BinA292
29372372 29372372 PRJNA1061474_P_NODE_47269_length_250_cov_0.870056_g47023_i0 PRJNA1061474 47269 250 0.870056 2.17514 Candidatus Sumerlaeota bacterium 2107588 Bacteria Bacteria 90.9 3.3e-19   NR MBN1868292.1 2107588 g47023 i0 60.5 0.972 81 32 97.2 0 245 3 13 93 MBN1868292.1 GTPase HflX [Candidatus Sumerlaeota bacterium] diamond 243 90.9 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         Candidatus Sumerlaeota bacterium
31742089 31742089 PRJNA1061474_P_NODE_47317_length_250_cov_0.870056_g47071_i0 PRJNA1061474 47317 250 0.870056 2.17514 Candidatus Sumerlaeota bacterium 2107588 Bacteria Bacteria 66.6 1.59e-10   NR MCX7014053.1 2107588 g47071 i0 42.5 2.58 73 42 87.6 0 247 29 537 609 MCX7014053.1 hypothetical protein [Candidatus Sumerlaeota bacterium] diamond 645 66.6 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         Candidatus Sumerlaeota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;