RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1061474", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Aminicenantota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Aminicenantota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA1061474 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27501410 27501410 PRJNA1061474_P_NODE_52343_length_245_cov_0.895349_g52097_i0 PRJNA1061474 52343 245 0.895349 2.19360505 Bacteria 2 Bacteria Bacteria 101 4.44e-24   NR OGD11934.1 1797269 g52097 i0 62.5 3.89387755102041 80 30 98 0 4 243 156 235 OGD11934.1 MAG: hypothetical protein A2Y86_00485 [Candidatus Aminicenantes bacterium RBG_13_62_12] diamond 954 101 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium RBG_13_62_12
27983049 27983049 PRJNA1061474_P_NODE_50445_length_247_cov_0.885057_g50199_i0 PRJNA1061474 50445 247 0.885057 2.18609079 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 67.8 1.48e-11   NR MBN2199092.1 2052149 g50199 i0 59.6 0.631578947368421 52 21 63.2 0 91 246 136 187 MBN2199092.1 hypothetical protein [Candidatus Aminicenantes bacterium] diamond 156 67.8 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
28203872 28203872 PRJNA1061474_P_NODE_47406_length_250_cov_0.870056_g47160_i0 PRJNA1061474 47406 250 0.870056 2.17514 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 144 7.74e-38   NR MCX6577933.1 2052149 g47160 i0 90.2 3.936 82 8 98.4 0 248 3 980 1061 MCX6577933.1 translocation/assembly module TamB domain-containing protein [Candidatus Aminicenantes bacterium] diamond 984 144 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;