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contig_metadata

17 rows where bioproject = "PRJNA1061474" and tax_clade = "Amoebozoa"

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tax_phylum 3

analysis 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 17 ✖

bioproject 1

  • PRJNA1061474 · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4004889 4004889 PRJNA1061474_P_NODE_34724_length_309_cov_1.593220_g34478_i0 PRJNA1061474 34724 309 1.59322 4.9230498 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 201 1.5e-63   NR PRP73841.1 1890364 g34478 i0 94.1 0.990291262135922 102 6 99 0 307 2 9 110 PRP73841.1 Rab5/RabF-family small GTPase [Planoprotostelium fungivorum] diamond 306 201 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
6556632 6556632 PRJNA1061474_P_NODE_41526_length_271_cov_1.555556_g41280_i0 PRJNA1061474 41526 271 1.555556 4.21555676 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 128 1.59e-34   NR PRP83381.1 1890364 g41280 i0 85.7 0.85239852398524 77 11 85.2 0 39 269 1 77 PRP83381.1 ribosomal protein S3a, component of cytosolic 80S ribosome and 40S small subunit [Planoprotostelium fungivorum] diamond 231 128 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
9106025 9106025 PRJNA1061474_P_NODE_34568_length_310_cov_1.544304_g34322_i0 PRJNA1061474 34568 310 1.544304 4.7873424 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 525 1.42e-144   NTclustered gi|300078496|gb|GU001158.1| 5778 g34322 i0 99.652 56.4774193548387 287 1 93 0 23 309 3650 3364 Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 17508 525 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
9939791 9939791 PRJNA1061474_P_NODE_27668_length_357_cov_2.158451_g27422_i0 PRJNA1061474 27668 357 2.158451 7.70567007 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 566 9.759999999999997e-157   NTclustered gi|909719645|gb|KT185625.1| 5778 g27422 i0 98.447 35.4985994397759 322 4 90 1 36 357 3880 3560 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 12673 566 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
12490573 12490573 PRJNA1061474_P_NODE_38650_length_287_cov_1.242991_g38404_i0 PRJNA1061474 38650 287 1.242991 3.56738417 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 52.8 0.027   NTclustered gi|66802431|ref|XM_629996.1| 352472 g38404 i0 100 0.195121951219512 28 0 10 0 215 242 791 764 Dictyostelium discoideum AX4 hypothetical protein (DDB_G0291768) mRNA, complete cds blastn 56 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
15480883 15480883 PRJNA1061474_P_NODE_22413_length_409_cov_1.431548_g22167_i0 PRJNA1061474 22413 409 1.431548 5.85503132 Entamoeba invadens 33085 Evosea other_Eukaryota 62.1 6.53e-5   NTclustered gi|511091352|dbj|AK423018.1| 33085 g22167 i0 78.723 8.29095354523227 94 18 23 2 202 294 857 765 Entamoeba invadens cDNA clone: Xei-008C04, hypothetical protein, complete cds, strain: IP1 blastn 3391 62.1 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba invadens
24404837 24404837 PRJNA1061474_P_NODE_48840_length_248_cov_0.880000_g48594_i0 PRJNA1061474 48840 248 0.88 2.1824 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 94.7 2.06e-20   NR XP_004353032.1 1257118 g48594 i0 69.7 6.3991935483871 66 18 79.8 1 198 1 1860 1923 XP_004353032.1 DEAD box RNA helicase, putative [Acanthamoeba castellanii str. Neff] diamond 1587 94.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26774129 26774129 PRJNA1061474_P_NODE_46421_length_250_cov_1.305085_g46175_i0 PRJNA1061474 46421 250 1.305085 3.2627125 Viridiplantae 33090 Evosea other_Eukaryota 104 5.65e-25   NR KYQ92109.1 361077 g46175 i0 51.2 2.952 82 40 98.4 0 247 2 155 236 KYQ92109.1 hypothetical protein DLAC_06949 [Tieghemostelium lacteum] diamond 738 105 0.990476190476191 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
26908917 26908917 PRJNA1061474_P_NODE_43722_length_259_cov_1.650538_g43476_i0 PRJNA1061474 43722 259 1.650538 4.27489342 Dictyostelium discoideum AX4 352472 Evosea other_Eukaryota 44.7 0.00901   NR XP_643304.1 352472 g43476 i0 31.1 0.857142857142857 74 46 82.2 3 44 256 249 320 XP_643304.1 cyclin-like F-box containing protein [Dictyostelium discoideum AX4] diamond 222 44.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
27256691 27256691 PRJNA1061474_P_NODE_44823_length_253_cov_1.444444_g44577_i0 PRJNA1061474 44823 253 1.444444 3.65444332 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 75.1 2.17e-14   NR PRP74054.1 1890364 g44577 i0 40.5 0.99604743083004 84 50 99.6 0 253 2 19 102 PRP74054.1 hypothetical protein PROFUN_08678 [Planoprotostelium fungivorum] diamond 252 75.1 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
28551569 28551569 PRJNA1061474_P_NODE_45467_length_251_cov_0.865169_g45221_i0 PRJNA1061474 45467 251 0.865169 2.17157419 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 50.1 1.03e-4   NR PRP84918.1 1890364 g45221 i0 32.9 0.944223107569721 79 52 94.4 1 1 237 266 343 PRP84918.1 hypothetical protein PROFUN_07572 [Planoprotostelium fungivorum] diamond 237 50.1 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
28583125 28583125 PRJNA1061474_P_NODE_38107_length_290_cov_1.064516_g37861_i0 PRJNA1061474 38107 290 1.064516 3.0870964 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 116 2.63e-30   NR PRP86688.1 1890364 g37861 i0 59.4 0.993103448275862 96 39 99.3 0 3 290 80 175 PRP86688.1 hypothetical protein PROFUN_05167 [Planoprotostelium fungivorum] diamond 288 116 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29561614 29561614 PRJNA1061474_P_NODE_46390_length_250_cov_1.395480_g46144_i0 PRJNA1061474 46390 250 1.39548 3.4887 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 116 2.15e-30   NR PRP83112.1 1890364 g46144 i0 70 0.96 80 24 96 0 240 1 105 184 PRP83112.1 hypothetical protein PROFUN_09791 [Planoprotostelium fungivorum] diamond 240 116 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29624424 29624424 PRJNA1061474_P_NODE_52730_length_245_cov_0.895349_g52484_i0 PRJNA1061474 52730 245 0.895349 2.19360505 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 142 8.27e-38   NR PRP74799.1 1890364 g52484 i0 79 0.991836734693878 81 17 99.2 0 243 1 241 321 PRP74799.1 actin binding protein [Planoprotostelium fungivorum] diamond 243 142 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
30762256 30762256 PRJNA1061474_P_NODE_47974_length_249_cov_0.875000_g47728_i0 PRJNA1061474 47974 249 0.875 2.17875 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 115 7.8199999999999985e-28   NR PRP86321.1 1890364 g47728 i0 66.7 2.89156626506024 81 27 97.6 0 7 249 797 877 PRP86321.1 hypothetical protein PROFUN_05462 [Planoprotostelium fungivorum] diamond 720 115 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
31038600 31038600 PRJNA1061474_P_NODE_52235_length_245_cov_1.354651_g51989_i0 PRJNA1061474 52235 245 1.354651 3.31889495 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 78.6 8.97e-15   NR XP_636911.1 352472 g51989 i0 71.2 2.05714285714286 52 15 63.7 0 86 241 21 72 XP_636911.1 3-oxoacid CoA-transferase [Dictyostelium discoideum AX4] diamond 504 79 0.994936708860759 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
31457672 31457672 PRJNA1061474_P_NODE_38016_length_290_cov_1.419355_g37770_i0 PRJNA1061474 38016 290 1.419355 4.1161295 Heterostelium album PN5 2086695 Evosea other_Eukaryota 115 8.73e-29   NR XP_020431082.1 670386 g37770 i0 59.1 1.90344827586207 93 38 96.2 0 281 3 165 257 XP_020431082.1 S60 ribosomal protein L32 [Heterostelium album PN500] diamond 552 115 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;