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contig_metadata

4 rows where bioproject = "PRJNA1059246", tax_phylum = "Promethearchaeota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 4 ✖

tax_phylum 1

  • Promethearchaeota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1059246 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26995298 26995298 PRJNA1059246_P_NODE_70562_length_243_cov_0.905882_g69936_i0 PRJNA1059246 70562 243 0.905882 2.20129326 root 1 Root_unresolved Root_unresolved 109 2.49e-26   NR NVM33981.1 2053489 g69936 i0 63.8 2.96296296296296 80 29 98.8 0 242 3 254 333 NVM33981.1 hypothetical protein [Promethearchaeota archaeon] diamond 720 110 0.990909090909091 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon
28141141 28141141 PRJNA1059246_P_NODE_57765_length_264_cov_1.612565_g57139_i0 PRJNA1059246 57765 264 1.612565 4.2571716 Promethearchaeota archaeon CR_4 1849166 Archaea Archaea 52 5.42e-6   NR OLS12533.1 1849166 g57139 i0 35.1 0.875 77 48 87.5 2 263 33 24 98 OLS12533.1 MAG: hypothetical protein RBG13Loki_3844 [Promethearchaeota archaeon CR_4] diamond 231 52 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon CR_4
31931858 31931858 PRJNA1059246_P_NODE_57217_length_266_cov_1.595855_g56591_i0 PRJNA1059246 57217 266 1.595855 4.2449743 Promethearchaeota archaeon 2053489 Archaea Archaea 57 3.73e-7   NR MEJ2293663.1 2053489 g56591 i0 52.9 0.575187969924812 51 22 57.5 1 254 102 233 281 MEJ2293663.1 aminotransferase class V-fold PLP-dependent enzyme [Promethearchaeota archaeon] diamond 153 57 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon
31963531 31963531 PRJNA1059246_P_NODE_72558_length_241_cov_0.916667_g71932_i0 PRJNA1059246 72558 241 0.916667 2.20916747 Promethearchaeota archaeon 2053489 Archaea Archaea 83.2 1.38e-16   NR MBD3196129.1 2053489 g71932 i0 53.2 0.983402489626556 79 36 97.1 1 1 234 84 162 MBD3196129.1 actin, cytoplasmic 2 [Promethearchaeota archaeon] diamond 237 83.2 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;