RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1059246", tax_phylum = "Cossaviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

  • Cossaviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1059246 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12930974 12930974 PRJNA1059246_P_NODE_5611_length_1046_cov_2.719424_g5181_i0 PRJNA1059246 5611 1046 2.719424 28.44517504 Tarsiger cyanurus ambidensovirus 2794449 Viruses Viruses 159 4.88e-41   NR QVW56842.1 2794449 g5181 i0 42.8 0.616634799235182 215 101 57.4 4 3 602 237 444 QVW56842.1 MAG: putative VP1 protein [Tarsiger cyanurus ambidensovirus] diamond 645 159 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Ambidensovirus Tarsiger cyanurus ambidensovirus
28867070 28867070 PRJNA1059246_P_NODE_928_length_2311_cov_2.587578_g833_i0 PRJNA1059246 928 2311 2.587578 59.79892758 Densovirinae sp. 2030127 Viruses Viruses 199 1.52e-51   NR XBS26016.1 2030127 g833 i0 34.6 0.887927304197317 381 213 48 10 1115 6 2 357 XBS26016.1 MAG: putative nonstructural protein 1 [Densovirinae sp.] diamond 2052 199 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Protoambidensovirus Protoambidensovirus incertum5
30003903 30003903 PRJNA1059246_P_NODE_39791_length_338_cov_1.045283_g39165_i0 PRJNA1059246 39791 338 1.045283 3.53305654 Tarsiger cyanurus ambidensovirus 2794449 Viruses Viruses 69.3 4.93e-11   NR QVW56842.1 2794449 g39165 i0 63.3 0.43491124260355 49 18 43.5 0 213 67 7 55 QVW56842.1 MAG: putative VP1 protein [Tarsiger cyanurus ambidensovirus] diamond 147 69.3 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Ambidensovirus Tarsiger cyanurus ambidensovirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;