RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA1059246", tax_phylum = "Candidatus Woesearchaeota" and tax_superkingdom = "Archaea"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Archaea · 3 ✖

tax_phylum 1

  • Candidatus Woesearchaeota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1059246 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29655997 29655997 PRJNA1059246_P_NODE_55430_length_272_cov_1.497487_g54804_i0 PRJNA1059246 55430 272 1.497487 4.07316464 Candidatus Woesearchaeota archaeon 2026803 Archaea Archaea 71.2 1.68e-13   NR MBD3319325.1 2026803 g54804 i0 45.7 0.772058823529412 70 30 68.4 1 74 259 56 125 MBD3319325.1 hypothetical protein [Candidatus Woesearchaeota archaeon] diamond 210 71.2 1 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon
31900359 31900359 PRJNA1059246_P_NODE_68677_length_245_cov_0.895349_g68051_i0 PRJNA1059246 68677 245 0.895349 2.19360505 Candidatus Woesearchaeota archaeon 2026803 Archaea Archaea 52.8 7.01e-7   NR MFA5796612.1 2026803 g68051 i0 43.1 1.49387755102041 58 33 71 0 245 72 15 72 MFA5796612.1 hypothetical protein [Candidatus Woesearchaeota archaeon] diamond 366 52.8 1 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon
32122000 32122000 PRJNA1059246_P_NODE_51418_length_285_cov_1.146226_g50792_i0 PRJNA1059246 51418 285 1.146226 3.2667441 Candidatus Woesearchaeota archaeon 2026803 Archaea Archaea 71.2 2.68e-13   NR MBS3109792.1 2026803 g50792 i0 55.7 0.642105263157895 61 24 61.1 1 192 19 71 131 MBS3109792.1 hypothetical protein [Candidatus Woesearchaeota archaeon] diamond 183 71.2 1 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;