RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1059246" and tax_phylum = "Candidatus Sumerlaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Sumerlaeota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1059246 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28006627 28006627 PRJNA1059246_P_NODE_63765_length_249_cov_0.875000_g63139_i0 PRJNA1059246 63765 249 0.875 2.17875 Pseudomonadati 3379134 Bacteria Bacteria 110 8.12e-27   NR MCX7049641.1 2107588 g63139 i0 81.5 6 54 10 65.1 0 170 9 5 58 MCX7049641.1 rhamnose/proton symporter RhaT [Candidatus Sumerlaeota bacterium] diamond 1494 111 0.990990990990991 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         Candidatus Sumerlaeota bacterium
32406589 32406589 PRJNA1059246_P_NODE_22459_length_476_cov_1.473945_g21837_i0 PRJNA1059246 22459 476 1.473945 7.0159782 Candidatus Sumerlaeota bacterium 2107588 Bacteria Bacteria 55.1 1.81e-5   NR MBN1902932.1 2107588 g21837 i0 25.2 1.82142857142857 127 88 79.4 3 52 429 133 253 MBN1902932.1 right-handed parallel beta-helix repeat-containing protein [Candidatus Sumerlaeota bacterium] diamond 867 55.1 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         Candidatus Sumerlaeota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;