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contig_metadata

31 rows where bioproject = "PRJNA1059246" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 31 ✖

bioproject 1

  • PRJNA1059246 · 31 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4003781 4003781 PRJNA1059246_P_NODE_61504_length_251_cov_1.235955_g60878_i0 PRJNA1059246 61504 251 1.235955 3.10224705 Haloferacaceae archaeon 2080321 Archaea Archaea 109 3.82e-28   NR MFB6154400.1 2080321 g60878 i0 62.7 1.9840637450199201 83 30 99.2 1 249 1 52 133 MFB6154400.1 peptide-methionine (S)-S-oxide reductase MsrA [Haloferacaceae archaeon] diamond 498 109 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae   Haloferacaceae archaeon
5279564 5279564 PRJNA1059246_P_NODE_19925_length_510_cov_2.151030_g19307_i0 PRJNA1059246 19925 510 2.15103 10.970253 Haloterrigena salinisoli 3132747 Archaea Archaea 52.8 0.05   NTclustered gi|2706837818|gb|CP149787.1| 3132747 g19307 i0 100 0.0549019607843137 28 0 5 0 405 432 831195 831168 Haloterrigena salinisoli strain KLK7 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Haloterrigena Haloterrigena salinisoli
10380111 10380111 PRJNA1059246_P_NODE_18769_length_529_cov_2.109649_g18152_i0 PRJNA1059246 18769 529 2.109649 11.16004321 Haloferax gibbonsii 35746 Archaea Archaea 60.2 3.1e-4   NTclustered gi|909826707|gb|CP011949.1| 35746 g18152 i0 100 0.741020793950851 32 0 6 0 307 338 282967 282998 Haloferax gibbonsii strain ARA6 plasmid pHG2, complete sequence blastn 392 60.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloferax Haloferax gibbonsii
10380183 10380183 PRJNA1059246_P_NODE_23529_length_463_cov_1.730769_g22905_i0 PRJNA1059246 23529 463 1.730769 8.01346047 Methanolapillus ohkumae 3028298 Archaea Archaea 52.8 0.045   NTclustered gi|2591778106|gb|CP131061.1| 3028298 g22905 i0 100 0.060475161987041 28 0 6 0 256 283 901472 901499 Methanolapillus ohkumae strain Am2 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanolapillus Methanolapillus ohkumae
10380309 10380309 PRJNA1059246_P_NODE_33489_length_375_cov_1.003311_g32863_i0 PRJNA1059246 33489 375 1.003311 3.76241625 Natronorubrum daqingense 588898 Archaea Archaea 56.5 0.003   NTclustered gi|1134979927|gb|CP019327.1| 588898 g32863 i0 92.308 0.104 39 3 10 0 155 193 906620 906582 Natronorubrum daqingense strain JX313, complete sequence blastn 39 56.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natronorubrum Natronorubrum daqingense
11656006 11656006 PRJNA1059246_P_NODE_71890_length_241_cov_1.375000_g71264_i0 PRJNA1059246 71890 241 1.375 3.31375 Thermoplasmatales archaeon 2268204 Archaea Archaea 54.7 0.006   NTclustered gi|2108414336|gb|CP070635.1| 2268204 g71264 i0 92.105 0.157676348547718 38 3 16 0 26 63 733372 733335 MAG: Thermoplasmatales archaeon isolate bin958 chromosome blastn 38 54.7 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales     Thermoplasmatales archaeon
12490503 12490503 PRJNA1059246_P_NODE_71790_length_241_cov_1.833333_g71164_i0 PRJNA1059246 71790 241 1.833333 4.41833253 root 1 Root_unresolved Root_unresolved 446 8.519999999999999e-121   NTclustered gi|436492|gb|U00707.1|PSU00707 33866 g71164 i0 100 11.5269709543568 241 0 100 0 1 241 1101 861 Pyrococcus sp. Deep Vent DNA polymerase precursor gene, complete cds blastn 2778 446 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Pyrococcus Pyrococcus sp.
14205670 14205670 PRJNA1059246_P_NODE_32052_length_384_cov_1.688103_g31426_i0 PRJNA1059246 32052 384 1.688103 6.48231552 Thermococcus indicus 2586643 Archaea Archaea 52.8 0.037   NTclustered gi|1681065834|gb|CP040846.1| 2586643 g31426 i0 100 0.0729166666666667 28 0 7 0 236 263 1644011 1644038 Thermococcus indicus strain IOH1 chromosome, complete genome blastn 28 52.8 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus indicus
16313951 16313951 PRJNA1059246_P_NODE_47833_length_299_cov_0.867257_g47207_i0 PRJNA1059246 47833 299 0.867257 2.59309843 Halobacterium 2239 Archaea Archaea 54.7 0.008   NTclustered gi|573484043|gb|CP007060.1| 751944 g47207 i0 100 0.193979933110368 29 0 10 0 44 72 2343187 2343215 Halobacterium sp. DL1, complete genome blastn 58 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halobacterium Halobacterium sp. DL1
16754330 16754330 PRJNA1059246_P_NODE_64634_length_248_cov_1.394286_g64008_i0 PRJNA1059246 64634 248 1.394286 3.45782928 Haloquadratum walsbyi 293091 Archaea Archaea 60.2 1.34e-4   NTclustered gi|109624723|emb|AM180088.1| 362976 g64008 i0 100 0.491935483870968 32 0 13 0 1 32 1275095 1275064 Haloquadratum walsbyi DSM 16790 complete genome blastn 122 60.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloquadratum Haloquadratum walsbyi
18029156 18029156 PRJNA1059246_P_NODE_68615_length_245_cov_0.895349_g67989_i0 PRJNA1059246 68615 245 0.895349 2.19360505 Halorussus pelagicus 2505977 Archaea Archaea 52.8 0.022   NTclustered gi|1560271289|gb|CP035119.1| 2505977 g67989 i0 96.774 0.126530612244898 31 1 13 0 75 105 2317467 2317497 Halorussus pelagicus strain RC-68 chromosome, complete genome blastn 31 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haladaptataceae Halorussus Halorussus pelagicus
18029221 18029221 PRJNA1059246_P_NODE_7975_length_863_cov_2.401266_g7465_i0 PRJNA1059246 7975 863 2.401266 20.72292558 Haloarcula ordinaria 3033390 Archaea Archaea 58.4 0.002   NTclustered gi|2463595535|gb|CP119789.1| 3033390 g7465 i0 94.737 0.0440324449594438 38 0 4 2 566 602 1318926 1318962 Haloarcula ordinaria strain ZS-22-S1 chromosome, complete genome blastn 38 58.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Haloarcula Haloarcula ordinaria
19302746 19302746 PRJNA1059246_P_NODE_35596_length_361_cov_1.756944_g34970_i0 PRJNA1059246 35596 361 1.756944 6.34256784 Haloarcula ordinaria 3033390 Archaea Archaea 54.7 0.01   NTclustered gi|2463595535|gb|CP119789.1| 3033390 g34970 i0 100 0.0803324099722992 29 0 8 0 313 341 649164 649136 Haloarcula ordinaria strain ZS-22-S1 chromosome, complete genome blastn 29 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Haloarcula Haloarcula ordinaria
23129165 23129165 PRJNA1059246_P_NODE_22559_length_475_cov_1.067164_g21937_i0 PRJNA1059246 22559 475 1.067164 5.069029 Natrinema sp. J7-2 406552 Archaea Archaea 60.2 2.76e-4   NTclustered gi|397680883|gb|CP003412.1| 406552 g21937 i0 97.143 0.642105263157895 35 1 7 0 270 304 1516063 1516097 Natrinema sp. J7-2, complete genome blastn 305 60.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natrinema Natrinema sp. J7-2
27311917 27311917 PRJNA1059246_P_NODE_40223_length_335_cov_2.030534_g39597_i0 PRJNA1059246 40223 335 2.030534 6.8022889 root 1 Root_unresolved Root_unresolved 45.8 0.00826   NR WP_286475720.1 2584467 g39597 i0 44.8 1.44179104477612 58 30 51.9 1 276 103 111 166 WP_286475720.1 CDC27 family protein [Methanobacterium aridiramus] diamond 483 46.2 0.991341991341991 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium aridiramus
27446474 27446474 PRJNA1059246_P_NODE_39903_length_337_cov_1.458333_g39277_i0 PRJNA1059246 39903 337 1.458333 4.91458221 Thermoplasmatota archaeon 2806419 Archaea Archaea 73.2 2.05e-12   NR MCU0798948.1 2806419 g39277 i0 72.3 1.25519287833828 47 13 41.8 0 141 1 15 61 MCU0798948.1 ATPase [Thermoplasmatota archaeon] diamond 423 73.2 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
27477728 27477728 PRJNA1059246_P_NODE_19383_length_519_cov_1.659193_g18765_i0 PRJNA1059246 19383 519 1.659193 8.61121167 Methanobacteriota archaeon 2026739 Archaea Archaea 219 5.12e-65   NR RMG34081.1 2026739 g18765 i0 66.7 1.90173410404624 165 53 94.2 2 519 31 403 567 RMG34081.1 MAG: S9 family peptidase [Methanobacteriota archaeon] diamond 987 219 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
27825248 27825248 PRJNA1059246_P_NODE_48764_length_294_cov_1.533937_g48138_i0 PRJNA1059246 48764 294 1.533937 4.50977478 Methanothrix sp. 90426 Archaea Archaea 52 2.87e-5   NR NMB86174.1 90426 g48138 i0 49.1 0.561224489795918 55 28 56.1 0 2 166 48 102 NMB86174.1 tetratricopeptide repeat protein [Methanothrix sp.] diamond 165 52 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
28077581 28077581 PRJNA1059246_P_NODE_37305_length_351_cov_2.093525_g36679_i0 PRJNA1059246 37305 351 2.093525 7.34827275 Methanosarcinales archaeon 2250255 Archaea Archaea 84.3 3.16e-16   NR RYE85578.1 2250255 g36679 i0 44.4 0.923076923076923 108 54 88.9 3 349 38 404 509 RYE85578.1 MAG: hypothetical protein EOO65_00010 [Methanosarcinales archaeon] diamond 324 84.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
28330265 28330265 PRJNA1059246_P_NODE_67546_length_246_cov_0.890173_g66920_i0 PRJNA1059246 67546 246 0.890173 2.18982558 Natronoarchaeum rubrum 755311 Archaea Archaea 60.1 1.46e-8   NR WP_256393113.1 755311 g66920 i0 54.8 1.51219512195122 62 25 74.4 2 61 243 4 63 WP_256393113.1 histidine phosphatase family protein [Natronoarchaeum rubrum] diamond 372 60.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronoarchaeaceae Natronoarchaeum Natronoarchaeum rubrum
28930202 28930202 PRJNA1059246_P_NODE_18568_length_533_cov_1.330435_g17951_i0 PRJNA1059246 18568 533 1.330435 7.09121855 Methanobacteriota archaeon 2026739 Archaea Archaea 90.1 3.54e-18   NR MAV59833.1 2026739 g17951 i0 40.7 4.4577861163227 113 66 63 1 376 41 164 276 MAV59833.1 hypothetical protein [Methanobacteriota archaeon] diamond 2376 90.1 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
29151612 29151612 PRJNA1059246_P_NODE_54649_length_275_cov_1.252475_g54023_i0 PRJNA1059246 54649 275 1.252475 3.44430625 Methanosarcinales archaeon 2250255 Archaea Archaea 67 9.09e-12   NR RYE81919.1 2250255 g54023 i0 42.1 0.829090909090909 76 42 81.8 2 2 226 34 108 RYE81919.1 MAG: hypothetical protein EOO65_06165 [Methanosarcinales archaeon] diamond 228 67 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
29372238 29372238 PRJNA1059246_P_NODE_15529_length_593_cov_1.184615_g14929_i0 PRJNA1059246 15529 593 1.184615 7.02476695 Methanoregula sp. 2052170 Archaea Archaea 77.8 8.44e-13   NR MDD1698370.1 2052170 g14929 i0 29.7 1.02192242833052 202 109 97.1 7 591 16 336 514 MDD1698370.1 GPI anchored serine-threonine rich family protein [Methanoregula sp.] diamond 606 77.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula Methanoregula sp.
29490224 29490224 PRJNA1059246_P_NODE_37150_length_352_cov_1.655914_g36524_i0 PRJNA1059246 37150 352 1.655914 5.82881728 Methanomada group 2283794 Archaea Archaea 58.2 3.48e-7   NR KYK25085.1 1803821 g36524 i0 40.6 2.96590909090909 69 38 56.3 2 346 149 202 270 KYK25085.1 MAG: hypothetical protein AYK26_02730 [Euryarchaeota archaeon SM23-78] diamond 1044 58.5 0.994871794871795 Archaea   Methanobacteriati Methanobacteriota         Euryarchaeota archaeon SM23-78
29972212 29972212 PRJNA1059246_P_NODE_45051_length_312_cov_0.966527_g44425_i0 PRJNA1059246 45051 312 0.966527 3.01556424 Methanothermus fervidus DSM 2 2180 Archaea Archaea 58.5 2.28e-7   NR ADP76834.1 523846 g44425 i0 38.7 0.721153846153846 75 45 72.1 1 87 311 4 77 ADP76834.1 AMP-dependent synthetase and ligase [Methanothermus fervidus DSM 2088] diamond 225 58.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanothermaceae Methanothermus Methanothermus fervidus
30027365 30027365 PRJNA1059246_P_NODE_72251_length_241_cov_0.916667_g71625_i0 PRJNA1059246 72251 241 0.916667 2.20916747 Archaea 2157 Archaea Archaea 50.1 8.26e-5   NR KYK25085.1 1803821 g71625 i0 37.9 4.49377593360996 66 38 78.4 2 189 1 202 267 KYK25085.1 MAG: hypothetical protein AYK26_02730 [Euryarchaeota archaeon SM23-78] diamond 1083 50.4 0.994047619047619 Archaea   Methanobacteriati Methanobacteriota         Euryarchaeota archaeon SM23-78
30730489 30730489 PRJNA1059246_P_NODE_47394_length_301_cov_1.013158_g46768_i0 PRJNA1059246 47394 301 1.013158 3.04960558 Candidatus Methanophagaceae archaeon 3386247 Archaea Archaea 72.4 2.63e-12   NR KAF5437882.1 3386247 g46768 i0 48.6 0.737541528239203 74 30 73.8 2 48 269 137 202 KAF5437882.1 Kazal-type serine protease inhibitor domain-containing protein [Candidatus Methanophagaceae archaeon] diamond 222 72.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Candidatus Methanophagales Candidatus Methanophagaceae   Candidatus Methanophagaceae archaeon
31014877 31014877 PRJNA1059246_P_NODE_58375_length_262_cov_1.539683_g57749_i0 PRJNA1059246 58375 262 1.539683 4.03396946 Methanomicrobiales archaeon 2184052 Archaea Archaea 56.2 9.2e-8   NR NYT06209.1 2184052 g57749 i0 38.2 1.54580152671756 68 42 77.9 0 204 1 1 68 NYT06209.1 hypothetical protein [Methanomicrobiales archaeon] diamond 405 56.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales     Methanomicrobiales archaeon
31868527 31868527 PRJNA1059246_P_NODE_42437_length_324_cov_1.533865_g41811_i0 PRJNA1059246 42437 324 1.533865 4.9697226 Candidatus Hadarchaeales archaeon 3058034 Archaea Archaea 62.4 1.01e-8   NR MFN4133173.1 3058034 g41811 i0 31.4 0.972222222222222 105 64 95.4 2 14 322 159 257 MFN4133173.1 hypothetical protein [Candidatus Hadarchaeales archaeon] diamond 315 62.4 1 Archaea   Methanobacteriati Candidatus Hadarchaeota Candidatus Hadarchaeia Candidatus Hadarchaeales     Candidatus Hadarchaeales archaeon
32058462 32058462 PRJNA1059246_P_NODE_46438_length_305_cov_1.793103_g45812_i0 PRJNA1059246 46438 305 1.793103 5.46896415 Methanogenium marinum 348610 Archaea Archaea 40.8 0.0489   NR WP_274923711.1 348610 g45812 i0 43.9 0.40327868852459 41 23 40.3 0 162 40 7 47 WP_274923711.1 hypothetical protein [Methanogenium marinum] diamond 123 40.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanogenium Methanogenium marinum
32848131 32848131 PRJNA1059246_P_NODE_57840_length_264_cov_1.481675_g57214_i0 PRJNA1059246 57840 264 1.481675 3.911622 Methanobacterium arcticum 386456 Archaea Archaea 48.9 2.98e-4   NR WP_052379777.1 386456 g57214 i0 64.5 0.727272727272727 31 11 35.2 0 260 168 214 244 WP_052379777.1 tetratricopeptide repeat protein, partial [Methanobacterium arcticum] diamond 192 48.9 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium arcticum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;