RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1059246", tax_kingdom = "Bacillati" and tax_phylum = "Candidatus Margulisiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Margulisiibacteriota · 1 ✖

tax_kingdom 1

  • Bacillati · 1 ✖

bioproject 1

  • PRJNA1059246 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26718386 26718386 PRJNA1059246_P_NODE_12001_length_688_cov_2.047154_g11427_i0 PRJNA1059246 12001 688 2.047154 14.08441952 Candidatus Margulisiibacteriota bacterium 2053573 Bacteria Bacteria 51.6 8.61e-4   NR HVO23093.1 2053573 g11427 i0 35.8 0.597383720930233 137 67 54.9 9 221 598 13 139 HVO23093.1 hypothetical protein [Candidatus Margulisiibacteriota bacterium] diamond 411 51.6 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Margulisiibacteriota         Candidatus Margulisiibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;