RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1059246", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA1059246 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27066904 27066904 PRJNA1059246_P_NODE_49642_length_290_cov_1.419355_g49016_i0 PRJNA1059246 49642 290 1.419355 4.1161295 Fidelibacterota bacterium 2026760 Bacteria Bacteria 56.2 1.21e-6   NR GIT65650.1 2026760 g49016 i0 51.8 4.41724137931034 56 23 54.8 3 5 163 757 811 GIT65650.1 MAG: hypothetical protein Ct9H300mP24_0280 [Fidelibacterota bacterium] diamond 1281 56.2 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
28385252 28385252 PRJNA1059246_P_NODE_55526_length_272_cov_1.226131_g54900_i0 PRJNA1059246 55526 272 1.226131 3.33507632 Pseudomonadati 3379134 Bacteria Bacteria 86.3 2.56e-17   NR MCH7574119.1 2026760 g54900 i0 62.3 2.01838235294118 61 23 67.3 0 271 89 424 484 MCH7574119.1 S8 family peptidase [Fidelibacterota bacterium] diamond 549 86.3 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
32058494 32058494 PRJNA1059246_P_NODE_68678_length_245_cov_0.895349_g68052_i0 PRJNA1059246 68678 245 0.895349 2.19360505 Fidelibacterota bacterium 2026760 Bacteria Bacteria 48.9 2.48e-4   NR HIA23651.1 2026760 g68052 i0 42.6 1.44489795918367 61 30 69.8 2 5 175 96 155 HIA23651.1 hypothetical protein [Fidelibacterota bacterium] diamond 354 48.9 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;