RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1059246", tax_clade = "FCB group" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA1059246 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26623774 26623774 PRJNA1059246_P_NODE_38781_length_343_cov_1.711111_g38155_i0 PRJNA1059246 38781 343 1.711111 5.86911073 Balneolaceae bacterium 2053516 Bacteria Bacteria 45.8 0.0103   NR MEQ9263970.1 2053516 g38155 i0 36.4 0.577259475218659 66 41 56.9 1 56 250 1228 1293 MEQ9263970.1 DUF2341 domain-containing protein [Balneolaceae bacterium] diamond 198 45.8 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium
27003603 27003603 PRJNA1059246_P_NODE_55582_length_272_cov_1.160804_g54956_i0 PRJNA1059246 55582 272 1.160804 3.15738688 Balneolaceae bacterium 2053516 Bacteria Bacteria 97.8 5.17e-22   NR MBO6523817.1 2053516 g54956 i0 59.8 3.71691176470588 82 25 90.4 2 269 24 199 272 MBO6523817.1 cyanophycinase [Balneolaceae bacterium] diamond 1011 97.8 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;